STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
mazF9_1mRNA interferase MazF9; Toxic component of a type II toxin-antitoxin (TA) system. (123 aa)    
Predicted Functional Partners:
pgbA
Plasminogen-binding protein PgbA.
      
 0.778
ALU99360.1
Hypothetical protein.
      
 0.777
ALU99751.1
Hypothetical protein.
       0.773
torZ_1
Trimethylamine-N-oxide reductase 2 precursor.
      
 0.764
ALV00217.1
Colicin V production protein.
      
 0.650
tdk_1
Thymidine kinase.
     
 0.615
ALU99753.1
Hypothetical protein.
       0.582
ALU99754.1
Hypothetical protein.
       0.582
ALU99755.1
Hypothetical protein.
       0.582
virB4
Type IV secretion system protein virB4.
      
 0.479
Your Current Organism:
Campylobacter coli
NCBI taxonomy Id: 195
Other names: ATCC 33559, C. coli, CCUG 11283, CCUG 14540, CCUG:33450 [[Campylobacter hyoilei]], CIP 70.80, CIP 7080, Campylobacter hyoilei, Campylobacter sp. OH-18-18281-4B, Campylobacter sp. OH-18-7816, DSM 4689, JCM 2529, LMG 6440, LMG 9860, LMG:6440, LMG:9860, NCTC 11366, Vibrio coli, strain RMIT 32A [[Campylobacter hyoilei]]
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.