STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ALU99888.1Intracellular multiplication and macrophage-killing protein. (1175 aa)    
Predicted Functional Partners:
hcpA
Major exported protein.
 
  
 0.934
ALU99895.1
Hypothetical protein.
 
  
 0.914
ALU99890.1
Hypothetical protein.
 
 
 0.889
ALU99899.1
Phage-related baseplate assembly protein.
 
  
 0.884
ALU99897.1
Hypothetical protein.
 
  
 0.873
ALU99891.1
Hypothetical protein.
 
  
 0.869
ALU99894.1
Hypothetical protein.
 
  
 0.864
ALU99887.1
Hypothetical protein.
  
  
 0.838
ALU99898.1
Hypothetical protein.
 
  
 0.837
ALU99915.1
Hypothetical protein.
 
  
 0.801
Your Current Organism:
Campylobacter coli
NCBI taxonomy Id: 195
Other names: ATCC 33559, C. coli, CCUG 11283, CCUG 14540, CCUG:33450 [[Campylobacter hyoilei]], CIP 70.80, CIP 7080, Campylobacter hyoilei, Campylobacter sp. OH-18-18281-4B, Campylobacter sp. OH-18-7816, DSM 4689, JCM 2529, LMG 6440, LMG 9860, LMG:6440, LMG:9860, NCTC 11366, Vibrio coli, strain RMIT 32A [[Campylobacter hyoilei]]
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.