Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| ALU99316.1 | apt | ATE51_01564 | ATE51_01696 | Hypothetical protein. | Adenine phosphoribosyltransferase; Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis. | 0.665 |
| ALU99316.1 | xerD_4 | ATE51_01564 | ATE51_02864 | Hypothetical protein. | Tyrosine recombinase XerD. | 0.506 |
| ALU99866.1 | xerD_4 | ATE51_02696 | ATE51_02864 | Phage lysozyme. | Tyrosine recombinase XerD. | 0.616 |
| ALU99951.1 | ALU99952.1 | ATE51_02866 | ATE51_02868 | Hypothetical protein. | WGR domain protein. | 0.746 |
| ALU99951.1 | xerD_4 | ATE51_02866 | ATE51_02864 | Hypothetical protein. | Tyrosine recombinase XerD. | 0.471 |
| ALU99952.1 | ALU99951.1 | ATE51_02868 | ATE51_02866 | WGR domain protein. | Hypothetical protein. | 0.746 |
| ALU99952.1 | xerD_4 | ATE51_02868 | ATE51_02864 | WGR domain protein. | Tyrosine recombinase XerD. | 0.457 |
| apt | ALU99316.1 | ATE51_01696 | ATE51_01564 | Adenine phosphoribosyltransferase; Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis. | Hypothetical protein. | 0.665 |
| apt | xerD_4 | ATE51_01696 | ATE51_02864 | Adenine phosphoribosyltransferase; Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis. | Tyrosine recombinase XerD. | 0.493 |
| soj | spo0C | ATE51_04264 | ATE51_04262 | Sporulation initiation inhibitor protein Soj. | Chromosome-partitioning protein Spo0J; Belongs to the ParB family. | 0.999 |
| soj | spoIIIE | ATE51_04264 | ATE51_01804 | Sporulation initiation inhibitor protein Soj. | DNA translocase SpoIIIE; Belongs to the FtsK/SpoIIIE/SftA family. | 0.486 |
| soj | topA | ATE51_04264 | ATE51_04312 | Sporulation initiation inhibitor protein Soj. | DNA topoisomerase 1; Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA- (5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supe [...] | 0.504 |
| soj | xerD_4 | ATE51_04264 | ATE51_02864 | Sporulation initiation inhibitor protein Soj. | Tyrosine recombinase XerD. | 0.476 |
| spo0C | soj | ATE51_04262 | ATE51_04264 | Chromosome-partitioning protein Spo0J; Belongs to the ParB family. | Sporulation initiation inhibitor protein Soj. | 0.999 |
| spo0C | spoIIIE | ATE51_04262 | ATE51_01804 | Chromosome-partitioning protein Spo0J; Belongs to the ParB family. | DNA translocase SpoIIIE; Belongs to the FtsK/SpoIIIE/SftA family. | 0.816 |
| spo0C | topA | ATE51_04262 | ATE51_04312 | Chromosome-partitioning protein Spo0J; Belongs to the ParB family. | DNA topoisomerase 1; Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA- (5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supe [...] | 0.506 |
| spo0C | xerD_4 | ATE51_04262 | ATE51_02864 | Chromosome-partitioning protein Spo0J; Belongs to the ParB family. | Tyrosine recombinase XerD. | 0.509 |
| spoIIIE | soj | ATE51_01804 | ATE51_04264 | DNA translocase SpoIIIE; Belongs to the FtsK/SpoIIIE/SftA family. | Sporulation initiation inhibitor protein Soj. | 0.486 |
| spoIIIE | spo0C | ATE51_01804 | ATE51_04262 | DNA translocase SpoIIIE; Belongs to the FtsK/SpoIIIE/SftA family. | Chromosome-partitioning protein Spo0J; Belongs to the ParB family. | 0.816 |
| spoIIIE | topA | ATE51_01804 | ATE51_04312 | DNA translocase SpoIIIE; Belongs to the FtsK/SpoIIIE/SftA family. | DNA topoisomerase 1; Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA- (5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supe [...] | 0.624 |
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