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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ylpA_2Lipoprotein YlpA precursor. (260 aa)    
Predicted Functional Partners:
ALV00035.1
Hypothetical protein.
       0.773
ALV00034.1
Type-F conjugative transfer system pilin assembly protein.
       0.763
ALV00037.1
Hypothetical protein.
       0.746
ALV00038.1
Hypothetical protein.
       0.746
ALV00033.1
Transcriptional repressor DicA.
       0.721
ALV00032.1
TraU protein.
       0.658
ALV00031.1
Hypothetical protein.
       0.618
ALV00030.1
Hypothetical protein.
       0.600
ALV00699.1
Protoporphyrinogen oxidase.
  
     0.538
ALV00204.1
Bacterial dynamin-like protein.
  
     0.513
Your Current Organism:
Campylobacter coli
NCBI taxonomy Id: 195
Other names: ATCC 33559, C. coli, CCUG 11283, CCUG 14540, CCUG:33450 [[Campylobacter hyoilei]], CIP 70.80, CIP 7080, Campylobacter hyoilei, Campylobacter sp. OH-18-18281-4B, Campylobacter sp. OH-18-7816, DSM 4689, JCM 2529, LMG 6440, LMG 9860, LMG:6440, LMG:9860, NCTC 11366, Vibrio coli, strain RMIT 32A [[Campylobacter hyoilei]]
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.