Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-occurrence
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[Homology]
Score
ctbGroup 3 truncated hemoglobin ctb. (128 aa)    
Predicted Functional Partners:
mrdB
Rod shape-determining protein RodA; Belongs to the SEDS family.
      
 0.675
perR
Transcriptional regulator PerR; Belongs to the Fur family.
      
 0.643
mrsA
Peptide methionine sulfoxide reductase MsrA; Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine.
   
  
 0.638
crp
cAMP-activated global transcriptional regulator CRP.
     
 0.633
glnQ_3
Glutamine transport ATP-binding protein GlnQ.
       0.547
glnP_2
Putative glutamine ABC transporter permease protein GlnP.
       0.547
yecS
Inner membrane amino-acid ABC transporter permease protein YecS.
       0.547
dsbL
Thiol:disulfide interchange protein DsbL precursor.
  
  
 0.545
vhb
Bacterial hemoglobin; Belongs to the globin family.
     
 0.529
peb1A
Major cell-binding factor precursor; Belongs to the bacterial solute-binding protein 3 family.
      
 0.451
Your Current Organism:
Campylobacter coli
NCBI taxonomy Id: 195
Other names: ATCC 33559, C. coli, CCUG 11283, CCUG 14540, CCUG:33450 [[Campylobacter hyoilei]], CIP 70.80, CIP 7080, Campylobacter hyoilei, Campylobacter sp. OH-18-18281-4B, Campylobacter sp. OH-18-7816, DSM 4689, JCM 2529, LMG 6440, LMG 9860, LMG:6440, LMG:9860, NCTC 11366, Vibrio coli, strain RMIT 32A [[Campylobacter hyoilei]]
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