Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
ALV00199.1Hypothetical protein. (318 aa)    
Predicted Functional Partners:
ALV00198.1
Hypothetical protein.
       0.604
zraS_1
Sensor protein ZraS.
  
 
 0.507
flgE_2
Flagellar hook protein FlgE.
   
   0.483
flgG_2
Flagellar basal-body rod protein FlgG.
   
   0.474
cheA
Chemotaxis protein CheA.
  
  
 0.450
flgB
Flagellar basal body rod protein FlgB; Structural component of flagellum, the bacterial motility apparatus. Part of the rod structure of flagellar basal body.
   
 
 0.435
fliP
Flagellar biosynthetic protein FliP precursor; Plays a role in the flagellum-specific transport system. Belongs to the FliP/MopC/SpaP family.
   
    0.428
fliI
Flagellum-specific ATP synthase.
  
    0.428
ALV00196.1
MORN repeat variant.
       0.405
ALV00197.1
Hypothetical protein.
       0.405
Your Current Organism:
Campylobacter coli
NCBI taxonomy Id: 195
Other names: ATCC 33559, C. coli, CCUG 11283, CCUG 14540, CCUG:33450 [[Campylobacter hyoilei]], CIP 70.80, CIP 7080, Campylobacter hyoilei, Campylobacter sp. OH-18-18281-4B, Campylobacter sp. OH-18-7816, DSM 4689, JCM 2529, LMG 6440, LMG 9860, LMG:6440, LMG:9860, NCTC 11366, Vibrio coli, strain RMIT 32A [[Campylobacter hyoilei]]
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