STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ALV00550.1Phage late control gene D protein (GPD). (325 aa)    
Predicted Functional Partners:
ALV00523.1
Phage tail sheath protein.
 
 
 0.963
ALV00531.1
Gene 25-like lysozyme.
 
   0.960
ALV00415.1
Phage tail sheath protein.
 
 
 0.955
ALV00407.1
Gene 25-like lysozyme.
 
   0.952
ALV00530.1
Baseplate J-like protein.
 
  
 0.933
ALV00529.1
Phage tail protein (Tail_P2_I).
 
  
 0.930
ALV00533.1
Phage-related baseplate assembly protein.
 
  
 0.930
ALV00528.1
Hypothetical protein.
 
    0.922
ALV00548.1
Phage P2 GpU.
  
  
 0.920
ALV00408.1
Baseplate J-like protein.
 
  
 0.919
Your Current Organism:
Campylobacter coli
NCBI taxonomy Id: 195
Other names: ATCC 33559, C. coli, CCUG 11283, CCUG 14540, CCUG:33450 [[Campylobacter hyoilei]], CIP 70.80, CIP 7080, Campylobacter hyoilei, Campylobacter sp. OH-18-18281-4B, Campylobacter sp. OH-18-7816, DSM 4689, JCM 2529, LMG 6440, LMG 9860, LMG:6440, LMG:9860, NCTC 11366, Vibrio coli, strain RMIT 32A [[Campylobacter hyoilei]]
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.