STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFM23017.1Hypothetical protein. (216 aa)    
Predicted Functional Partners:
SFM57832.1
Hypothetical protein.
 
    
0.810
erpA
Iron-sulfur cluster insertion protein; Required for insertion of 4Fe-4S clusters for at least IspG.
       0.752
SFM52089.1
Sel1 repeat-containing protein.
  
     0.720
SFM31129.1
ABC-2 type transport system permease protein.
  
  
 0.677
SFM46310.1
cob(II)yrinic acid a,c-diamide reductase.
  
  
 0.523
SFM49743.1
Nitroreductase.
  
  
 0.523
SFM59591.1
Serine/threonine protein kinase.
 
  
 0.517
argC
N-acetyl-gamma-glutamyl-phosphate reductase; Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde. Belongs to the NAGSA dehydrogenase family. Type 1 subfamily.
       0.457
SFM35261.1
Competence protein ComEC.
       0.422
SFM34166.1
Membrane-bound lytic murein transglycosylase D.
     
 0.404
Your Current Organism:
Ectothiorhodospira mobilis
NCBI taxonomy Id: 195064
Other names: ATCC 49921, DSM 237, DSM 4180 [[Ectothiorhodospira marismortui]], E. mobilis, Ectothiorhodospira marismortui, Ectothiorhodospira mobile, NBRC 103802, strain EG-1 [[Ectothiorhodospira marismortui]], strain Trueper 8112, strain Truper 8112
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.