STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFM28663.1MinD superfamily P-loop ATPase, contains an inserted ferredoxin domain. (299 aa)    
Predicted Functional Partners:
SFM26412.1
Pyruvate-ferredoxin/flavodoxin oxidoreductase.
    
 0.981
SFM28671.1
Predicted Fe-Mo cluster-binding protein, NifX family.
 
   
 0.955
SFM26609.1
Glutamate synthase (NADH) large subunit.
    
  0.933
SFM34616.1
NADH dehydrogenase subunit E.
   
 0.897
SFM28680.1
Wyosine [tRNA(Phe)-imidazoG37] synthetase, radical SAM superfamily.
 
     0.852
SFM28650.1
MinD superfamily P-loop ATPase, contains an inserted ferredoxin domain.
 
  
0.848
SFM28640.1
Hypothetical protein.
     
 0.792
SFM33497.1
NADPH-dependent glutamate synthase beta chain.
  
 
 0.784
SFM38208.1
7, 8-dihydropterin-6-yl-methyl-4-(beta-D- ribofuranosyl)aminobenzene 5'-phosphate synthase.
 
     0.781
SFM39328.1
Predicted DNA-binding protein, UPF0251 family; Belongs to the UPF0251 family.
 
     0.780
Your Current Organism:
Ectothiorhodospira mobilis
NCBI taxonomy Id: 195064
Other names: ATCC 49921, DSM 237, DSM 4180 [[Ectothiorhodospira marismortui]], E. mobilis, Ectothiorhodospira marismortui, Ectothiorhodospira mobile, NBRC 103802, strain EG-1 [[Ectothiorhodospira marismortui]], strain Trueper 8112, strain Truper 8112
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