STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFM34987.1Cyclopropane-fatty-acyl-phospholipid synthase. (405 aa)    
Predicted Functional Partners:
SFM35000.1
Hypothetical protein.
  
 0.996
SFM35016.1
Predicted NAD/FAD-binding protein.
  
 0.996
SFM34979.1
Protein of unknown function.
 
   
 0.804
SFM35070.1
Short-chain dehydrogenase.
 
     0.556
SFM31758.1
Flagellar protein FlaG.
   
   0.544
folE
GTP cyclohydrolase I.
       0.518
guaA
GMP synthase (glutamine-hydrolyzing); Catalyzes the synthesis of GMP from XMP.
   
 
 0.420
Your Current Organism:
Ectothiorhodospira mobilis
NCBI taxonomy Id: 195064
Other names: ATCC 49921, DSM 237, DSM 4180 [[Ectothiorhodospira marismortui]], E. mobilis, Ectothiorhodospira marismortui, Ectothiorhodospira mobile, NBRC 103802, strain EG-1 [[Ectothiorhodospira marismortui]], strain Trueper 8112, strain Truper 8112
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.