Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SFM26609.1 | argS | SAMN05421721_101256 | SAMN05421721_101229 | Glutamate synthase (NADH) large subunit. | arginyl-tRNA synthetase. | 0.474 |
SFM26609.1 | guaA | SAMN05421721_101256 | SAMN05421721_103183 | Glutamate synthase (NADH) large subunit. | GMP synthase (glutamine-hydrolyzing); Catalyzes the synthesis of GMP from XMP. | 0.980 |
SFM26609.1 | guaB | SAMN05421721_101256 | SAMN05421721_103182 | Glutamate synthase (NADH) large subunit. | Inosine-5'-monophosphate dehydrogenase; Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth. Belongs to the IMPDH/GMPR family. | 0.833 |
SFM26609.1 | pheT | SAMN05421721_101256 | SAMN05421721_11059 | Glutamate synthase (NADH) large subunit. | phenylalanyl-tRNA synthetase beta subunit; Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily. | 0.900 |
SFM26609.1 | purL | SAMN05421721_101256 | SAMN05421721_1026 | Glutamate synthase (NADH) large subunit. | Phosphoribosylformylglycinamidine synthase; Phosphoribosylformylglycinamidine synthase involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. | 0.958 |
SFM26609.1 | pyrG | SAMN05421721_101256 | SAMN05421721_102144 | Glutamate synthase (NADH) large subunit. | CTP synthase; Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen. Regulates intracellular CTP levels through interactions with the four ribonucleotide triphosphates. | 0.760 |
SFM61070.1 | guaA | SAMN05421721_11440 | SAMN05421721_103183 | CBS domain-containing protein. | GMP synthase (glutamine-hydrolyzing); Catalyzes the synthesis of GMP from XMP. | 0.985 |
SFM61070.1 | purL | SAMN05421721_11440 | SAMN05421721_1026 | CBS domain-containing protein. | Phosphoribosylformylglycinamidine synthase; Phosphoribosylformylglycinamidine synthase involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. | 0.511 |
argS | SFM26609.1 | SAMN05421721_101229 | SAMN05421721_101256 | arginyl-tRNA synthetase. | Glutamate synthase (NADH) large subunit. | 0.474 |
argS | guaA | SAMN05421721_101229 | SAMN05421721_103183 | arginyl-tRNA synthetase. | GMP synthase (glutamine-hydrolyzing); Catalyzes the synthesis of GMP from XMP. | 0.999 |
argS | lysS | SAMN05421721_101229 | SAMN05421721_12110 | arginyl-tRNA synthetase. | lysyl-tRNA synthetase, class II; Belongs to the class-II aminoacyl-tRNA synthetase family. | 0.965 |
argS | pheT | SAMN05421721_101229 | SAMN05421721_11059 | arginyl-tRNA synthetase. | phenylalanyl-tRNA synthetase beta subunit; Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily. | 0.937 |
argS | purL | SAMN05421721_101229 | SAMN05421721_1026 | arginyl-tRNA synthetase. | Phosphoribosylformylglycinamidine synthase; Phosphoribosylformylglycinamidine synthase involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. | 0.751 |
argS | pyrG | SAMN05421721_101229 | SAMN05421721_102144 | arginyl-tRNA synthetase. | CTP synthase; Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen. Regulates intracellular CTP levels through interactions with the four ribonucleotide triphosphates. | 0.878 |
argS | rplK | SAMN05421721_101229 | SAMN05421721_107144 | arginyl-tRNA synthetase. | LSU ribosomal protein L11P; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. | 0.643 |
guaA | SFM26609.1 | SAMN05421721_103183 | SAMN05421721_101256 | GMP synthase (glutamine-hydrolyzing); Catalyzes the synthesis of GMP from XMP. | Glutamate synthase (NADH) large subunit. | 0.980 |
guaA | SFM61070.1 | SAMN05421721_103183 | SAMN05421721_11440 | GMP synthase (glutamine-hydrolyzing); Catalyzes the synthesis of GMP from XMP. | CBS domain-containing protein. | 0.985 |
guaA | argS | SAMN05421721_103183 | SAMN05421721_101229 | GMP synthase (glutamine-hydrolyzing); Catalyzes the synthesis of GMP from XMP. | arginyl-tRNA synthetase. | 0.999 |
guaA | guaB | SAMN05421721_103183 | SAMN05421721_103182 | GMP synthase (glutamine-hydrolyzing); Catalyzes the synthesis of GMP from XMP. | Inosine-5'-monophosphate dehydrogenase; Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth. Belongs to the IMPDH/GMPR family. | 0.999 |
guaA | lysS | SAMN05421721_103183 | SAMN05421721_12110 | GMP synthase (glutamine-hydrolyzing); Catalyzes the synthesis of GMP from XMP. | lysyl-tRNA synthetase, class II; Belongs to the class-II aminoacyl-tRNA synthetase family. | 0.983 |
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