Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SFM24108.1 | SFM31156.1 | SAMN05421721_10172 | SAMN05421721_102233 | Aminopeptidase N. | Leucyl aminopeptidase; Belongs to the peptidase M17 family. | 0.885 |
SFM24108.1 | SFM54916.1 | SAMN05421721_10172 | SAMN05421721_10952 | Aminopeptidase N. | Cysteine synthase; Belongs to the cysteine synthase/cystathionine beta- synthase family. | 0.789 |
SFM24108.1 | SFM55515.1 | SAMN05421721_10172 | SAMN05421721_10994 | Aminopeptidase N. | Aspartate aminotransferase. | 0.839 |
SFM24108.1 | glyA | SAMN05421721_10172 | SAMN05421721_10550 | Aminopeptidase N. | Glycine hydroxymethyltransferase; Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF-independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism. | 0.877 |
SFM24108.1 | gshA | SAMN05421721_10172 | SAMN05421721_10189 | Aminopeptidase N. | Glutamate-cysteine ligase; Belongs to the glutamate--cysteine ligase type 1 family. Type 1 subfamily. | 0.851 |
SFM24108.1 | gshB | SAMN05421721_10172 | SAMN05421721_11620 | Aminopeptidase N. | Glutathione synthase; Belongs to the prokaryotic GSH synthase family. | 0.846 |
SFM24108.1 | pepA | SAMN05421721_10172 | SAMN05421721_103192 | Aminopeptidase N. | Aminopeptidase A. Metallo peptidase. MEROPS family M17; Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N- terminal amino acids from various peptides. | 0.869 |
SFM31156.1 | SFM24108.1 | SAMN05421721_102233 | SAMN05421721_10172 | Leucyl aminopeptidase; Belongs to the peptidase M17 family. | Aminopeptidase N. | 0.885 |
SFM31156.1 | SFM35643.1 | SAMN05421721_102233 | SAMN05421721_103191 | Leucyl aminopeptidase; Belongs to the peptidase M17 family. | DNA polymerase III, chi subunit. | 0.456 |
SFM31156.1 | SFM54916.1 | SAMN05421721_102233 | SAMN05421721_10952 | Leucyl aminopeptidase; Belongs to the peptidase M17 family. | Cysteine synthase; Belongs to the cysteine synthase/cystathionine beta- synthase family. | 0.747 |
SFM31156.1 | SFM55515.1 | SAMN05421721_102233 | SAMN05421721_10994 | Leucyl aminopeptidase; Belongs to the peptidase M17 family. | Aspartate aminotransferase. | 0.851 |
SFM31156.1 | glyA | SAMN05421721_102233 | SAMN05421721_10550 | Leucyl aminopeptidase; Belongs to the peptidase M17 family. | Glycine hydroxymethyltransferase; Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF-independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism. | 0.840 |
SFM31156.1 | gshA | SAMN05421721_102233 | SAMN05421721_10189 | Leucyl aminopeptidase; Belongs to the peptidase M17 family. | Glutamate-cysteine ligase; Belongs to the glutamate--cysteine ligase type 1 family. Type 1 subfamily. | 0.839 |
SFM31156.1 | gshB | SAMN05421721_102233 | SAMN05421721_11620 | Leucyl aminopeptidase; Belongs to the peptidase M17 family. | Glutathione synthase; Belongs to the prokaryotic GSH synthase family. | 0.865 |
SFM31156.1 | pepA | SAMN05421721_102233 | SAMN05421721_103192 | Leucyl aminopeptidase; Belongs to the peptidase M17 family. | Aminopeptidase A. Metallo peptidase. MEROPS family M17; Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N- terminal amino acids from various peptides. | 0.873 |
SFM35643.1 | SFM31156.1 | SAMN05421721_103191 | SAMN05421721_102233 | DNA polymerase III, chi subunit. | Leucyl aminopeptidase; Belongs to the peptidase M17 family. | 0.456 |
SFM35643.1 | SFM35669.1 | SAMN05421721_103191 | SAMN05421721_103193 | DNA polymerase III, chi subunit. | Lipopolysaccharide export system permease protein. | 0.633 |
SFM35643.1 | SFM35674.1 | SAMN05421721_103191 | SAMN05421721_103194 | DNA polymerase III, chi subunit. | Lipopolysaccharide export system permease protein. | 0.616 |
SFM35643.1 | pepA | SAMN05421721_103191 | SAMN05421721_103192 | DNA polymerase III, chi subunit. | Aminopeptidase A. Metallo peptidase. MEROPS family M17; Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N- terminal amino acids from various peptides. | 0.782 |
SFM35669.1 | SFM35643.1 | SAMN05421721_103193 | SAMN05421721_103191 | Lipopolysaccharide export system permease protein. | DNA polymerase III, chi subunit. | 0.633 |
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