STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFM39813.1Chromosome partitioning protein. (266 aa)    
Predicted Functional Partners:
SFM61341.1
Chromosome partitioning protein, ParB family; Belongs to the ParB family.
 
 0.957
SFM39827.1
Purine-binding chemotaxis protein CheW.
 
 
 0.951
cheB-2
Two-component system, chemotaxis family, response regulator CheB; Involved in chemotaxis. Part of a chemotaxis signal transduction system that modulates chemotaxis in response to various stimuli. Catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins or MCP) by CheR. Also mediates the irreversible deamidation of specific glutamine residues to glutamic acid. Belongs to the CheB family.
 
    0.799
SFM39798.1
Chemotaxis protein MotB.
  
    0.780
SFM65694.1
AAA domain-containing protein.
  
     0.771
SFM39779.1
Chemotaxis protein MotA.
  
    0.725
SFM39741.1
Chemotaxis protein CheZ; Plays an important role in bacterial chemotaxis signal transduction pathway by accelerating the dephosphorylation of phosphorylated CheY (CheY-P).
 
    0.720
SFM39842.1
CheW protein.
 
   0.700
SFM39752.1
Two-component system, chemotaxis family, sensor kinase CheA.
 
    0.683
SFM39693.1
Flagellar biosynthesis protein FlhG.
 
  
 0.589
Your Current Organism:
Ectothiorhodospira mobilis
NCBI taxonomy Id: 195064
Other names: ATCC 49921, DSM 237, DSM 4180 [[Ectothiorhodospira marismortui]], E. mobilis, Ectothiorhodospira marismortui, Ectothiorhodospira mobile, NBRC 103802, strain EG-1 [[Ectothiorhodospira marismortui]], strain Trueper 8112, strain Truper 8112
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.