STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFM43370.1poly(R)-hydroxyalkanoic acid synthase, class III, PhaE subunit. (387 aa)    
Predicted Functional Partners:
SFM43384.1
Polyhydroxyalkanoate synthase.
 
  
 0.995
SFM43294.1
3-oxoacyl-[acyl-carrier-protein] reductase; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
 
  
 0.928
SFM43324.1
Polyhydroxyalkanoate synthesis repressor PhaR.
 
   
 0.783
SFM47360.1
Predicted arabinose efflux permease, MFS family.
  
     0.582
SFM49924.1
Chorismate lyase / 3-hydroxybenzoate synthase.
  
     0.581
SFM31238.1
Phosphotransacetylase.
    
  0.575
SFM43354.1
acetyl-CoA acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family.
 
   
 0.575
SFM59944.1
Hypothetical protein.
  
     0.575
SFM62029.1
Hypothetical protein.
  
     0.489
SFM34616.1
NADH dehydrogenase subunit E.
   
 
  0.488
Your Current Organism:
Ectothiorhodospira mobilis
NCBI taxonomy Id: 195064
Other names: ATCC 49921, DSM 237, DSM 4180 [[Ectothiorhodospira marismortui]], E. mobilis, Ectothiorhodospira marismortui, Ectothiorhodospira mobile, NBRC 103802, strain EG-1 [[Ectothiorhodospira marismortui]], strain Trueper 8112, strain Truper 8112
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.