STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFM43631.1Zinc transport system permease protein. (273 aa)    
Predicted Functional Partners:
znuC
Zinc transport system ATP-binding protein; Part of the ABC transporter complex ZnuABC involved in zinc import. Responsible for energy coupling to the transport system. Belongs to the ABC transporter superfamily. Zinc importer (TC 3.A.1.15.5) family.
 0.999
SFM43692.1
Zinc transport system substrate-binding protein.
 
 
 0.999
SFM26111.1
Mn2+ and Fe2+ transporters of the NRAMP family.
   
  
 0.732
fur-3
Fur family transcriptional regulator, zinc uptake regulator; Belongs to the Fur family.
 
  
 0.619
fur-2
Fur family transcriptional regulator, iron response regulator; Belongs to the Fur family.
 
  
 0.530
fur
Fur family transcriptional regulator, ferric uptake regulator; Belongs to the Fur family.
 
  
 0.484
SFM41807.1
Iron complex transport system ATP-binding protein.
   
 0.469
SFM25242.1
BirA family transcriptional regulator, biotin operon repressor / biotin-[acetyl-CoA-carboxylase] ligase.
       0.445
SFM48934.1
Lipopolysaccharide export system ATP-binding protein.
 
   
 0.444
SFM24281.1
Putative ABC transport system permease protein.
  
 
 0.433
Your Current Organism:
Ectothiorhodospira mobilis
NCBI taxonomy Id: 195064
Other names: ATCC 49921, DSM 237, DSM 4180 [[Ectothiorhodospira marismortui]], E. mobilis, Ectothiorhodospira marismortui, Ectothiorhodospira mobile, NBRC 103802, strain EG-1 [[Ectothiorhodospira marismortui]], strain Trueper 8112, strain Truper 8112
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