Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SFM30598.1 | SFM46714.1 | SAMN05421721_102190 | SAMN05421721_106115 | Putative ABC transport system ATP-binding protein. | TatD DNase family protein. | 0.400 |
SFM30598.1 | metG | SAMN05421721_102190 | SAMN05421721_101184 | Putative ABC transport system ATP-binding protein. | methionyl-tRNA synthetase; Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation. | 0.430 |
SFM46699.1 | SFM46714.1 | SAMN05421721_106114 | SAMN05421721_106115 | tRNA A37 threonylcarbamoyladenosine dehydratase. | TatD DNase family protein. | 0.780 |
SFM46699.1 | SFM46735.1 | SAMN05421721_106114 | SAMN05421721_106116 | tRNA A37 threonylcarbamoyladenosine dehydratase. | ferredoxin--NADP+ reductase. | 0.470 |
SFM46714.1 | SFM30598.1 | SAMN05421721_106115 | SAMN05421721_102190 | TatD DNase family protein. | Putative ABC transport system ATP-binding protein. | 0.400 |
SFM46714.1 | SFM46699.1 | SAMN05421721_106115 | SAMN05421721_106114 | TatD DNase family protein. | tRNA A37 threonylcarbamoyladenosine dehydratase. | 0.780 |
SFM46714.1 | SFM46735.1 | SAMN05421721_106115 | SAMN05421721_106116 | TatD DNase family protein. | ferredoxin--NADP+ reductase. | 0.604 |
SFM46714.1 | SFM58468.1 | SAMN05421721_106115 | SAMN05421721_1123 | TatD DNase family protein. | Single-strand binding protein; Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism. | 0.428 |
SFM46714.1 | fliE | SAMN05421721_106115 | SAMN05421721_104156 | TatD DNase family protein. | Flagellar hook-basal body complex protein FliE. | 0.466 |
SFM46714.1 | metG | SAMN05421721_106115 | SAMN05421721_101184 | TatD DNase family protein. | methionyl-tRNA synthetase; Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation. | 0.511 |
SFM46735.1 | SFM46699.1 | SAMN05421721_106116 | SAMN05421721_106114 | ferredoxin--NADP+ reductase. | tRNA A37 threonylcarbamoyladenosine dehydratase. | 0.470 |
SFM46735.1 | SFM46714.1 | SAMN05421721_106116 | SAMN05421721_106115 | ferredoxin--NADP+ reductase. | TatD DNase family protein. | 0.604 |
SFM58468.1 | SFM46714.1 | SAMN05421721_1123 | SAMN05421721_106115 | Single-strand binding protein; Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism. | TatD DNase family protein. | 0.428 |
SFM58468.1 | metG | SAMN05421721_1123 | SAMN05421721_101184 | Single-strand binding protein; Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism. | methionyl-tRNA synthetase; Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation. | 0.625 |
fliE | SFM46714.1 | SAMN05421721_104156 | SAMN05421721_106115 | Flagellar hook-basal body complex protein FliE. | TatD DNase family protein. | 0.466 |
metG | SFM30598.1 | SAMN05421721_101184 | SAMN05421721_102190 | methionyl-tRNA synthetase; Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation. | Putative ABC transport system ATP-binding protein. | 0.430 |
metG | SFM46714.1 | SAMN05421721_101184 | SAMN05421721_106115 | methionyl-tRNA synthetase; Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation. | TatD DNase family protein. | 0.511 |
metG | SFM58468.1 | SAMN05421721_101184 | SAMN05421721_1123 | methionyl-tRNA synthetase; Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation. | Single-strand binding protein; Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism. | 0.625 |