Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SFM30078.1 | SFM45823.1 | SAMN05421721_102152 | SAMN05421721_10653 | Protein required for attachment to host cells. | Protein of unknown function. | 0.405 |
SFM33381.1 | SFM45823.1 | SAMN05421721_10329 | SAMN05421721_10653 | Small conductance mechanosensitive channel. | Protein of unknown function. | 0.513 |
SFM45789.1 | SFM45802.1 | SAMN05421721_10651 | SAMN05421721_10652 | HAMP domain-containing protein. | DNA-binding transcriptional response regulator, NtrC family, contains REC, AAA-type ATPase, and a Fis-type DNA-binding domains. | 0.954 |
SFM45789.1 | SFM45823.1 | SAMN05421721_10651 | SAMN05421721_10653 | HAMP domain-containing protein. | Protein of unknown function. | 0.843 |
SFM45802.1 | SFM45789.1 | SAMN05421721_10652 | SAMN05421721_10651 | DNA-binding transcriptional response regulator, NtrC family, contains REC, AAA-type ATPase, and a Fis-type DNA-binding domains. | HAMP domain-containing protein. | 0.954 |
SFM45802.1 | SFM45823.1 | SAMN05421721_10652 | SAMN05421721_10653 | DNA-binding transcriptional response regulator, NtrC family, contains REC, AAA-type ATPase, and a Fis-type DNA-binding domains. | Protein of unknown function. | 0.552 |
SFM45823.1 | SFM30078.1 | SAMN05421721_10653 | SAMN05421721_102152 | Protein of unknown function. | Protein required for attachment to host cells. | 0.405 |
SFM45823.1 | SFM33381.1 | SAMN05421721_10653 | SAMN05421721_10329 | Protein of unknown function. | Small conductance mechanosensitive channel. | 0.513 |
SFM45823.1 | SFM45789.1 | SAMN05421721_10653 | SAMN05421721_10651 | Protein of unknown function. | HAMP domain-containing protein. | 0.843 |
SFM45823.1 | SFM45802.1 | SAMN05421721_10653 | SAMN05421721_10652 | Protein of unknown function. | DNA-binding transcriptional response regulator, NtrC family, contains REC, AAA-type ATPase, and a Fis-type DNA-binding domains. | 0.552 |
SFM45823.1 | SFM50343.1 | SAMN05421721_10653 | SAMN05421721_107125 | Protein of unknown function. | Hypothetical protein. | 0.420 |
SFM45823.1 | SFM59090.1 | SAMN05421721_10653 | SAMN05421721_11253 | Protein of unknown function. | Putative salt-induced outer membrane protein. | 0.504 |
SFM50343.1 | SFM45823.1 | SAMN05421721_107125 | SAMN05421721_10653 | Hypothetical protein. | Protein of unknown function. | 0.420 |
SFM59090.1 | SFM45823.1 | SAMN05421721_11253 | SAMN05421721_10653 | Putative salt-induced outer membrane protein. | Protein of unknown function. | 0.504 |