Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| SFM39466.1 | SFM39676.1 | SAMN05421721_104158 | SAMN05421721_104172 | Flagellar motor switch protein FliG; FliG is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation. | Flagellar biosynthesis protein FlhF. | 0.983 |
| SFM39466.1 | SFM40127.1 | SAMN05421721_104158 | SAMN05421721_104200 | Flagellar motor switch protein FliG; FliG is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation. | EAL domain, c-di-GMP-specific phosphodiesterase class I (or its enzymatically inactive variant). | 0.870 |
| SFM39466.1 | SFM45772.1 | SAMN05421721_104158 | SAMN05421721_10650 | Flagellar motor switch protein FliG; FliG is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation. | CBS domain-containing protein. | 0.502 |
| SFM39466.1 | SFM50380.1 | SAMN05421721_104158 | SAMN05421721_107128 | Flagellar motor switch protein FliG; FliG is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation. | CobQ/CobB/MinD/ParA nucleotide binding domain-containing protein. | 0.699 |
| SFM39466.1 | SFM52036.1 | SAMN05421721_104158 | SAMN05421721_1089 | Flagellar motor switch protein FliG; FliG is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation. | Conserved hypothetical protein (putative transposase or invertase). | 0.890 |
| SFM39676.1 | SFM39466.1 | SAMN05421721_104172 | SAMN05421721_104158 | Flagellar biosynthesis protein FlhF. | Flagellar motor switch protein FliG; FliG is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation. | 0.983 |
| SFM39676.1 | SFM40127.1 | SAMN05421721_104172 | SAMN05421721_104200 | Flagellar biosynthesis protein FlhF. | EAL domain, c-di-GMP-specific phosphodiesterase class I (or its enzymatically inactive variant). | 0.620 |
| SFM39676.1 | SFM45772.1 | SAMN05421721_104172 | SAMN05421721_10650 | Flagellar biosynthesis protein FlhF. | CBS domain-containing protein. | 0.554 |
| SFM39676.1 | SFM50380.1 | SAMN05421721_104172 | SAMN05421721_107128 | Flagellar biosynthesis protein FlhF. | CobQ/CobB/MinD/ParA nucleotide binding domain-containing protein. | 0.969 |
| SFM39676.1 | SFM52036.1 | SAMN05421721_104172 | SAMN05421721_1089 | Flagellar biosynthesis protein FlhF. | Conserved hypothetical protein (putative transposase or invertase). | 0.711 |
| SFM40127.1 | SFM39466.1 | SAMN05421721_104200 | SAMN05421721_104158 | EAL domain, c-di-GMP-specific phosphodiesterase class I (or its enzymatically inactive variant). | Flagellar motor switch protein FliG; FliG is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation. | 0.870 |
| SFM40127.1 | SFM39676.1 | SAMN05421721_104200 | SAMN05421721_104172 | EAL domain, c-di-GMP-specific phosphodiesterase class I (or its enzymatically inactive variant). | Flagellar biosynthesis protein FlhF. | 0.620 |
| SFM40127.1 | SFM50380.1 | SAMN05421721_104200 | SAMN05421721_107128 | EAL domain, c-di-GMP-specific phosphodiesterase class I (or its enzymatically inactive variant). | CobQ/CobB/MinD/ParA nucleotide binding domain-containing protein. | 0.635 |
| SFM40127.1 | SFM52036.1 | SAMN05421721_104200 | SAMN05421721_1089 | EAL domain, c-di-GMP-specific phosphodiesterase class I (or its enzymatically inactive variant). | Conserved hypothetical protein (putative transposase or invertase). | 0.612 |
| SFM45772.1 | SFM39466.1 | SAMN05421721_10650 | SAMN05421721_104158 | CBS domain-containing protein. | Flagellar motor switch protein FliG; FliG is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation. | 0.502 |
| SFM45772.1 | SFM39676.1 | SAMN05421721_10650 | SAMN05421721_104172 | CBS domain-containing protein. | Flagellar biosynthesis protein FlhF. | 0.554 |
| SFM45772.1 | SFM50380.1 | SAMN05421721_10650 | SAMN05421721_107128 | CBS domain-containing protein. | CobQ/CobB/MinD/ParA nucleotide binding domain-containing protein. | 0.668 |
| SFM45772.1 | SFM52036.1 | SAMN05421721_10650 | SAMN05421721_1089 | CBS domain-containing protein. | Conserved hypothetical protein (putative transposase or invertase). | 0.602 |
| SFM50361.1 | SFM50380.1 | SAMN05421721_107127 | SAMN05421721_107128 | Hypothetical protein. | CobQ/CobB/MinD/ParA nucleotide binding domain-containing protein. | 0.811 |
| SFM50361.1 | SFM50395.1 | SAMN05421721_107127 | SAMN05421721_107129 | Hypothetical protein. | Hypothetical protein. | 0.775 |
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