STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFM68480.1Ribbon-helix-helix protein, copG family. (65 aa)    
Predicted Functional Partners:
SFM68456.1
Type I restriction enzyme M protein.
       0.605
SFM68440.1
Type I restriction enzyme, S subunit.
       0.602
SFM68408.1
Protein of unknown function.
       0.601
SFM68424.1
Abortive infection C-terminus.
       0.601
SFM35730.1
SPFH domain, Band 7 family protein.
  
  
 0.564
SFM42861.1
Protease FtsH subunit HflC; HflC and HflK could regulate a protease.
  
  
 0.564
SFM42879.1
Protease FtsH subunit HflK; HflC and HflK could encode or regulate a protease.
  
  
 0.564
SFM68525.1
Hypothetical protein.
       0.554
SFM68496.1
Hypothetical protein.
       0.553
SFM68515.1
Hypothetical protein.
       0.553
Your Current Organism:
Ectothiorhodospira mobilis
NCBI taxonomy Id: 195064
Other names: ATCC 49921, DSM 237, DSM 4180 [[Ectothiorhodospira marismortui]], E. mobilis, Ectothiorhodospira marismortui, Ectothiorhodospira mobile, NBRC 103802, strain EG-1 [[Ectothiorhodospira marismortui]], strain Trueper 8112, strain Truper 8112
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