node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CPE0046 | CPE2061 | gene:10489277 | gene:10491331 | Hypothetical protein; Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection. | 1171 aa, similar to gp:CPA17727_2 pyruvate ferredoxin oxidoreductase from Clostridium pasteurianum (1175 aa); 73.6% identity in 1167 aa overlap. | 0.443 |
CPE0046 | cinA | gene:10489277 | gene:10489376 | Hypothetical protein; Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection. | 412 aa, similar to sp:CINA_BACSU PUTATIVE COMPETENCE-DAMAGE PROTEIN from Bacillus subtilis (416 aa); 43.1% identity in 394 aa overlap; CPE0132; Belongs to the CinA family. | 0.500 |
CPE0046 | dnaX | gene:10489277 | gene:10489276 | Hypothetical protein; Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection. | DNA polymerase III gamma and tau subunits; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity. | 0.847 |
CPE0046 | recR | gene:10489277 | gene:10489278 | Hypothetical protein; Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection. | DNA repair and genetic recombination protein; May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO. | 0.967 |
CPE2061 | CPE0046 | gene:10491331 | gene:10489277 | 1171 aa, similar to gp:CPA17727_2 pyruvate ferredoxin oxidoreductase from Clostridium pasteurianum (1175 aa); 73.6% identity in 1167 aa overlap. | Hypothetical protein; Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection. | 0.443 |
CPE2061 | dnaX | gene:10491331 | gene:10489276 | 1171 aa, similar to gp:CPA17727_2 pyruvate ferredoxin oxidoreductase from Clostridium pasteurianum (1175 aa); 73.6% identity in 1167 aa overlap. | DNA polymerase III gamma and tau subunits; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity. | 0.443 |
CPE2061 | recO | gene:10491331 | gene:10491284 | 1171 aa, similar to gp:CPA17727_2 pyruvate ferredoxin oxidoreductase from Clostridium pasteurianum (1175 aa); 73.6% identity in 1167 aa overlap. | Probable DNA repair protein; Involved in DNA repair and RecF pathway recombination. | 0.417 |
CPE2061 | recR | gene:10491331 | gene:10489278 | 1171 aa, similar to gp:CPA17727_2 pyruvate ferredoxin oxidoreductase from Clostridium pasteurianum (1175 aa); 73.6% identity in 1167 aa overlap. | DNA repair and genetic recombination protein; May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO. | 0.728 |
cinA | CPE0046 | gene:10489376 | gene:10489277 | 412 aa, similar to sp:CINA_BACSU PUTATIVE COMPETENCE-DAMAGE PROTEIN from Bacillus subtilis (416 aa); 43.1% identity in 394 aa overlap; CPE0132; Belongs to the CinA family. | Hypothetical protein; Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection. | 0.500 |
cinA | comEC-2 | gene:10489376 | gene:10490921 | 412 aa, similar to sp:CINA_BACSU PUTATIVE COMPETENCE-DAMAGE PROTEIN from Bacillus subtilis (416 aa); 43.1% identity in 394 aa overlap; CPE0132; Belongs to the CinA family. | 284 aa, similar to pir:T44344 late competence protein homolog comEC from Bacillus halodurans (266 aa); 33.5% identity in 242 aa overlap. Putative N-terminal signal sequence was found by PSORT; CPE1657. | 0.671 |
cinA | dnaX | gene:10489376 | gene:10489276 | 412 aa, similar to sp:CINA_BACSU PUTATIVE COMPETENCE-DAMAGE PROTEIN from Bacillus subtilis (416 aa); 43.1% identity in 394 aa overlap; CPE0132; Belongs to the CinA family. | DNA polymerase III gamma and tau subunits; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity. | 0.421 |
cinA | recO | gene:10489376 | gene:10491284 | 412 aa, similar to sp:CINA_BACSU PUTATIVE COMPETENCE-DAMAGE PROTEIN from Bacillus subtilis (416 aa); 43.1% identity in 394 aa overlap; CPE0132; Belongs to the CinA family. | Probable DNA repair protein; Involved in DNA repair and RecF pathway recombination. | 0.589 |
cinA | recR | gene:10489376 | gene:10489278 | 412 aa, similar to sp:CINA_BACSU PUTATIVE COMPETENCE-DAMAGE PROTEIN from Bacillus subtilis (416 aa); 43.1% identity in 394 aa overlap; CPE0132; Belongs to the CinA family. | DNA repair and genetic recombination protein; May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO. | 0.636 |
cinA | ruvA | gene:10489376 | gene:10491217 | 412 aa, similar to sp:CINA_BACSU PUTATIVE COMPETENCE-DAMAGE PROTEIN from Bacillus subtilis (416 aa); 43.1% identity in 394 aa overlap; CPE0132; Belongs to the CinA family. | Holliday junction DNA helicase; The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. RuvA stimulates, in the presence of DNA, the weak ATPase activity of RuvB. | 0.506 |
cinA | ruvB | gene:10489376 | gene:10491216 | 412 aa, similar to sp:CINA_BACSU PUTATIVE COMPETENCE-DAMAGE PROTEIN from Bacillus subtilis (416 aa); 43.1% identity in 394 aa overlap; CPE0132; Belongs to the CinA family. | Holliday junction DNA helicase; The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. | 0.637 |
comEC-2 | cinA | gene:10490921 | gene:10489376 | 284 aa, similar to pir:T44344 late competence protein homolog comEC from Bacillus halodurans (266 aa); 33.5% identity in 242 aa overlap. Putative N-terminal signal sequence was found by PSORT; CPE1657. | 412 aa, similar to sp:CINA_BACSU PUTATIVE COMPETENCE-DAMAGE PROTEIN from Bacillus subtilis (416 aa); 43.1% identity in 394 aa overlap; CPE0132; Belongs to the CinA family. | 0.671 |
comEC-2 | recR | gene:10490921 | gene:10489278 | 284 aa, similar to pir:T44344 late competence protein homolog comEC from Bacillus halodurans (266 aa); 33.5% identity in 242 aa overlap. Putative N-terminal signal sequence was found by PSORT; CPE1657. | DNA repair and genetic recombination protein; May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO. | 0.651 |
comEC-2 | ruvA | gene:10490921 | gene:10491217 | 284 aa, similar to pir:T44344 late competence protein homolog comEC from Bacillus halodurans (266 aa); 33.5% identity in 242 aa overlap. Putative N-terminal signal sequence was found by PSORT; CPE1657. | Holliday junction DNA helicase; The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. RuvA stimulates, in the presence of DNA, the weak ATPase activity of RuvB. | 0.591 |
comEC-2 | ruvB | gene:10490921 | gene:10491216 | 284 aa, similar to pir:T44344 late competence protein homolog comEC from Bacillus halodurans (266 aa); 33.5% identity in 242 aa overlap. Putative N-terminal signal sequence was found by PSORT; CPE1657. | Holliday junction DNA helicase; The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. | 0.550 |
dnaX | CPE0046 | gene:10489276 | gene:10489277 | DNA polymerase III gamma and tau subunits; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity. | Hypothetical protein; Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection. | 0.847 |