Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| CPE0053 | CPE0251 | gene:10489284 | gene:10489500 | 358 aa, similar to pir:E71001 probable transaminase (EC 2.6.1.-) PH1308 from Pyrococcus horikoshii (386 aa); 38.6% identity in 342 aa overlap. | 440 aa, similar to pir:H82985 hypothetical protein from Pseudomonas aeruginosa (423 aa); 26.6% identity in 331 aa overlap. Putative N-terminal signal sequence was found by PSORT. | 0.571 |
| CPE0250 | CPE0251 | gene:10489499 | gene:10489500 | Capsular polysaccharide biosynthesis protein; 257 aa, similar to prf:2315479F epsC gene from Lactococcus lactis (254 aa); 37.4% identity in 235 aa overlap; EpsC. | 440 aa, similar to pir:H82985 hypothetical protein from Pseudomonas aeruginosa (423 aa); 26.6% identity in 331 aa overlap. Putative N-terminal signal sequence was found by PSORT. | 0.402 |
| CPE0251 | CPE0053 | gene:10489500 | gene:10489284 | 440 aa, similar to pir:H82985 hypothetical protein from Pseudomonas aeruginosa (423 aa); 26.6% identity in 331 aa overlap. Putative N-terminal signal sequence was found by PSORT. | 358 aa, similar to pir:E71001 probable transaminase (EC 2.6.1.-) PH1308 from Pyrococcus horikoshii (386 aa); 38.6% identity in 342 aa overlap. | 0.571 |
| CPE0251 | CPE0250 | gene:10489500 | gene:10489499 | 440 aa, similar to pir:H82985 hypothetical protein from Pseudomonas aeruginosa (423 aa); 26.6% identity in 331 aa overlap. Putative N-terminal signal sequence was found by PSORT. | Capsular polysaccharide biosynthesis protein; 257 aa, similar to prf:2315479F epsC gene from Lactococcus lactis (254 aa); 37.4% identity in 235 aa overlap; EpsC. | 0.402 |
| CPE0251 | CPE0698 | gene:10489500 | gene:10489960 | 440 aa, similar to pir:H82985 hypothetical protein from Pseudomonas aeruginosa (423 aa); 26.6% identity in 331 aa overlap. Putative N-terminal signal sequence was found by PSORT. | Hypothetical protein; 97 aa, similar to N-terminal of sp:PHEA_AQUAE P-PROTEIN [INCLUDES: CHORISMATE MUTASE (EC 5.4.99.5) (CM) from Aquifex aeolicus (362 aa); 30.1% identity in 93 aa overlap. | 0.409 |
| CPE0251 | glyA | gene:10489500 | gene:10491198 | 440 aa, similar to pir:H82985 hypothetical protein from Pseudomonas aeruginosa (423 aa); 26.6% identity in 331 aa overlap. Putative N-terminal signal sequence was found by PSORT. | Serine hydroxymethyltransferase; Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF-independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism. | 0.619 |
| CPE0698 | CPE0251 | gene:10489960 | gene:10489500 | Hypothetical protein; 97 aa, similar to N-terminal of sp:PHEA_AQUAE P-PROTEIN [INCLUDES: CHORISMATE MUTASE (EC 5.4.99.5) (CM) from Aquifex aeolicus (362 aa); 30.1% identity in 93 aa overlap. | 440 aa, similar to pir:H82985 hypothetical protein from Pseudomonas aeruginosa (423 aa); 26.6% identity in 331 aa overlap. Putative N-terminal signal sequence was found by PSORT. | 0.409 |
| CPE0698 | glyA | gene:10489960 | gene:10491198 | Hypothetical protein; 97 aa, similar to N-terminal of sp:PHEA_AQUAE P-PROTEIN [INCLUDES: CHORISMATE MUTASE (EC 5.4.99.5) (CM) from Aquifex aeolicus (362 aa); 30.1% identity in 93 aa overlap. | Serine hydroxymethyltransferase; Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF-independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism. | 0.501 |
| glyA | CPE0251 | gene:10491198 | gene:10489500 | Serine hydroxymethyltransferase; Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF-independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism. | 440 aa, similar to pir:H82985 hypothetical protein from Pseudomonas aeruginosa (423 aa); 26.6% identity in 331 aa overlap. Putative N-terminal signal sequence was found by PSORT. | 0.619 |
| glyA | CPE0698 | gene:10491198 | gene:10489960 | Serine hydroxymethyltransferase; Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF-independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism. | Hypothetical protein; 97 aa, similar to N-terminal of sp:PHEA_AQUAE P-PROTEIN [INCLUDES: CHORISMATE MUTASE (EC 5.4.99.5) (CM) from Aquifex aeolicus (362 aa); 30.1% identity in 93 aa overlap. | 0.501 |