Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CPE0252 | CPE0253 | gene:10489501 | gene:10489502 | Hypothetical protein; 148 aa, similar to N-terminal of sp:DIVB_BACSU DIVISION INITIATION PROTEIN (CELL DIVISION AND SPORULATION PROTEIN) from Bacillus subtilis (263 aa); 25.2% identity in 115 aa overlap. Putative N-terminal signal sequence was found by PSORT. | Hypothetical protein; 67 aa, no significant homology. | 0.537 |
CPE0252 | CPE0254 | gene:10489501 | gene:10489503 | Hypothetical protein; 148 aa, similar to N-terminal of sp:DIVB_BACSU DIVISION INITIATION PROTEIN (CELL DIVISION AND SPORULATION PROTEIN) from Bacillus subtilis (263 aa); 25.2% identity in 115 aa overlap. Putative N-terminal signal sequence was found by PSORT. | Hypothetical protein; 82 aa, no significant homology. | 0.525 |
CPE0253 | CPE0252 | gene:10489502 | gene:10489501 | Hypothetical protein; 67 aa, no significant homology. | Hypothetical protein; 148 aa, similar to N-terminal of sp:DIVB_BACSU DIVISION INITIATION PROTEIN (CELL DIVISION AND SPORULATION PROTEIN) from Bacillus subtilis (263 aa); 25.2% identity in 115 aa overlap. Putative N-terminal signal sequence was found by PSORT. | 0.537 |
CPE0253 | CPE0254 | gene:10489502 | gene:10489503 | Hypothetical protein; 67 aa, no significant homology. | Hypothetical protein; 82 aa, no significant homology. | 0.978 |
CPE0254 | CPE0252 | gene:10489503 | gene:10489501 | Hypothetical protein; 82 aa, no significant homology. | Hypothetical protein; 148 aa, similar to N-terminal of sp:DIVB_BACSU DIVISION INITIATION PROTEIN (CELL DIVISION AND SPORULATION PROTEIN) from Bacillus subtilis (263 aa); 25.2% identity in 115 aa overlap. Putative N-terminal signal sequence was found by PSORT. | 0.525 |
CPE0254 | CPE0253 | gene:10489503 | gene:10489502 | Hypothetical protein; 82 aa, no significant homology. | Hypothetical protein; 67 aa, no significant homology. | 0.978 |