STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CPE0337460 aa, similar to gp:BCE237785_5 putative amino acid transporter from Bacillus cereus (471 aa); 44.1% identity in 454 aa overlap. 11 putative transmembrane regions were found by PSORT. (460 aa)    
Predicted Functional Partners:
CPE0544
463 aa, similar to gpu:AE004180_4 proton/peptide symporter family protein from Vibrio cholerae (514 aa); 33.2% identity in 407 aa overlap. 8 putative transmembrane regions were found by PSORT.
  
 
 0.535
CPE0736
Probable transporter; 443 aa, similar to gpu:AP001510_169 BH0994 gene product from Bacillus halodurans (395 aa); 24.9% identity in 369 aa overlap. Putative N-terminal signal sequence and 11 putative transmembrane regions were found by PSORT.
  
     0.524
CPE0336
310 aa, similar to pir:D71226 hypothetical protein PH0070 from Pyrococcus horikoshii (275 aa); 30.4% identity in 273 aa overlap. Putative N-terminal signal sequence and 8 putative transmembrane regions were found by PSORT.
  
  
 0.465
pulB
Pullulanase; 1064 aa, similar to sp:PULA_THEMA PULLULANASE PRECURSOR (EC 3.2.1.41) (ALPHA-DEXTRIN ENDO-1,6-ALPHA-GLUCOSIDASE) (PULLULAN 6-GLUCANOHYDROLASE) from Thermotoga maritima (strain MSB8) (843 aa); 37.1% identity in 832 aa overlap; CPE1587; Belongs to the glycosyl hydrolase 13 family.
  
 0.410
CPE0066
Amylopullulanase; 606 aa, similar to prf:2008115A amylopullulanase from Thermoanaerobacterium saccharolyticum (1288 aa); 39.2% identity in 587 aa overlap; Belongs to the glycosyl hydrolase 13 family.
   
 0.403
CPE0418
Exo-alpha-1,4-glucosidase; 554 aa, similar to gp:BACEA14G_1 exo-alpha-1,4-glucosidase from Bacillus stearothermophilus (555 aa); 62.3% identity in 551 aa overlap.
   
 0.403
CPE0562
Alpha-glucosidase; 555 aa, similar to gp:AF216220_1 alpha-glucosidase from Bacillus sp. DG0303 (562 aa); 62.5% identity in 552 aa overlap.
   
 0.403
CPE0805
Cyclomaltodextrinase; 610 aa, similar to pir:S63617 cymH protein from Klebsiella oxytoca (598 aa); 54.7% identity in 563 aa overlap; Belongs to the glycosyl hydrolase 13 family.
   
 0.403
Your Current Organism:
Clostridium perfringens 13
NCBI taxonomy Id: 195102
Other names: C. perfringens str. 13, Clostridium perfringens str. 13
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