Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
proA | purL | gene:10491912 | gene:10489941 | Gamma-glutamyl phosphate reductase; Catalyzes the NADPH-dependent reduction of L-glutamate 5- phosphate into L-glutamate 5-semialdehyde and phosphate. The product spontaneously undergoes cyclization to form 1-pyrroline-5-carboxylate. Belongs to the gamma-glutamyl phosphate reductase family. | 1266 aa, similar to pir:G81961 phosphoribosylformylglycinamidine synthase (EC 6.3.5.3) NMA0445 from Neisseria meningitidis (group A strain Z2491) (1320 aa); 25.6% identity in 1056 aa overlap. 1 putative transmembrane region was found by PSORT; CPE0680. | 0.562 |
proA | sfsA | gene:10491912 | gene:10489854 | Gamma-glutamyl phosphate reductase; Catalyzes the NADPH-dependent reduction of L-glutamate 5- phosphate into L-glutamate 5-semialdehyde and phosphate. The product spontaneously undergoes cyclization to form 1-pyrroline-5-carboxylate. Belongs to the gamma-glutamyl phosphate reductase family. | 230 aa, similar to gpu:AP001510_217 sugar fermentation stimulation protein from Bacillus halodurans (243 aa); 34.6% identity in 228 aa overlap. 1 putative transmembrane region was found by PSORT; CPE0593; Belongs to the SfsA family. | 0.477 |
purL | proA | gene:10489941 | gene:10491912 | 1266 aa, similar to pir:G81961 phosphoribosylformylglycinamidine synthase (EC 6.3.5.3) NMA0445 from Neisseria meningitidis (group A strain Z2491) (1320 aa); 25.6% identity in 1056 aa overlap. 1 putative transmembrane region was found by PSORT; CPE0680. | Gamma-glutamyl phosphate reductase; Catalyzes the NADPH-dependent reduction of L-glutamate 5- phosphate into L-glutamate 5-semialdehyde and phosphate. The product spontaneously undergoes cyclization to form 1-pyrroline-5-carboxylate. Belongs to the gamma-glutamyl phosphate reductase family. | 0.562 |
purL | sfsA | gene:10489941 | gene:10489854 | 1266 aa, similar to pir:G81961 phosphoribosylformylglycinamidine synthase (EC 6.3.5.3) NMA0445 from Neisseria meningitidis (group A strain Z2491) (1320 aa); 25.6% identity in 1056 aa overlap. 1 putative transmembrane region was found by PSORT; CPE0680. | 230 aa, similar to gpu:AP001510_217 sugar fermentation stimulation protein from Bacillus halodurans (243 aa); 34.6% identity in 228 aa overlap. 1 putative transmembrane region was found by PSORT; CPE0593; Belongs to the SfsA family. | 0.406 |
sfsA | proA | gene:10489854 | gene:10491912 | 230 aa, similar to gpu:AP001510_217 sugar fermentation stimulation protein from Bacillus halodurans (243 aa); 34.6% identity in 228 aa overlap. 1 putative transmembrane region was found by PSORT; CPE0593; Belongs to the SfsA family. | Gamma-glutamyl phosphate reductase; Catalyzes the NADPH-dependent reduction of L-glutamate 5- phosphate into L-glutamate 5-semialdehyde and phosphate. The product spontaneously undergoes cyclization to form 1-pyrroline-5-carboxylate. Belongs to the gamma-glutamyl phosphate reductase family. | 0.477 |
sfsA | purL | gene:10489854 | gene:10489941 | 230 aa, similar to gpu:AP001510_217 sugar fermentation stimulation protein from Bacillus halodurans (243 aa); 34.6% identity in 228 aa overlap. 1 putative transmembrane region was found by PSORT; CPE0593; Belongs to the SfsA family. | 1266 aa, similar to pir:G81961 phosphoribosylformylglycinamidine synthase (EC 6.3.5.3) NMA0445 from Neisseria meningitidis (group A strain Z2491) (1320 aa); 25.6% identity in 1056 aa overlap. 1 putative transmembrane region was found by PSORT; CPE0680. | 0.406 |