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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CPE0669Hypothetical protein; 335 aa, pertially similar to gp:AF047005_1 asparagine-rich protein from Plasmodium falciparum (728 aa); 28% identity in 236 aa overlap. Putative N-terminal signal sequence was found by PSORT. (335 aa)    
Predicted Functional Partners:
CPE0667
Probable transposase; 117 aa, similar to N-terminal of pir:JC4292 probable transposase from thermophilic bacterium PS-3 (369 aa); 37.7% identity in 106 aa overlap. Probably truncated; IS13.
       0.425
CPE0668
Probable transposase; 286 aa, similar to gp:CDI131844_3 putative transposase from Clostridium difficile (408 aa); 47.4% identity in 270 aa overlap.
       0.425
CPE0666
90 aa, similar to pir:F75335 probable transposase from Deinococcus radiodurans (strain R1) (140 aa); 56.9% identity in 58 aa overlap. Probably truncated.
       0.417
Your Current Organism:
Clostridium perfringens 13
NCBI taxonomy Id: 195102
Other names: C. perfringens str. 13, Clostridium perfringens str. 13
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