STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CPE0873Hypothetical protein; 133 aa, no significant homology. Putative N-terminal signal sequence and 2 putative transmembrane regions were found by PSORT. (133 aa)    
Predicted Functional Partners:
CPE0874
Hypothetical protein; 72 aa, no significant homology. Putative N-terminal signal sequence and 1 putative transmembrane region were found by PSORT.
       0.497
CPE0872
591 aa, similar to pir:D81414 probable aminopeptidase Cj0653c from Campylobacter jejuni (strain NCTC 11168) (596 aa); 44.5% identity in 587 aa overlap.
       0.434
Your Current Organism:
Clostridium perfringens 13
NCBI taxonomy Id: 195102
Other names: C. perfringens str. 13, Clostridium perfringens str. 13
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.