STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CPE1111Hypothetical protein; 52 aa, no significant homology. Putative N-terminal signal sequence and 1 putative transmembrane region were found by PSORT. (52 aa)    
Predicted Functional Partners:
CPE1112
Hypothetical protein; 88 aa, no significant homology.
       0.773
CPE1110
Phage-related conserved hypothetical protein; 365 aa, similar to pir:T28355 ORF MSV194 ALI motif gene family protein from Melanoplus sanguinipes entomopoxvirus (409 aa); 28.2% identity in 195 aa overlap.
       0.737
CPE1113
Hypothetical protein; 127 aa, no significant homology.
       0.645
CPE1114
Hypothetical protein; 59 aa, no significant homology. Putative N-terminal signal sequence and 1 putative transmembrane region were found by PSORT.
       0.645
CPE1115
Hypothetical protein; 80 aa, no significant homology.
       0.645
CPE1116
Phage-related conserved hypothetical protein; 136 aa, similar to prf:2419278BV ORF from bacteriophage phi-PVL (113 aa); 33.7% identity in 95 aa overlap.
       0.500
CPE1117
194 aa, similar to pir:T00134 hypothetical protein 4 from Staphylococcus aureus phage phi PVL (155 aa); 28% identity in 150 aa overlap.
       0.485
CPE1118
Probable phage-related terminase; 558 aa, similar to gp:AF198256_11 phage D3 terminase-like protein from Haemophilus influenzae (555 aa); 25.9% identity in 528 aa overlap. 2 putative transmembrane regions were found by PSORT.
       0.485
CPE1119
Hypothetical protein; 57 aa, no significant homology. Putative N-terminal signal sequence and 1 putative transmembrane region were found by PSORT.
       0.482
CPE1120
407 aa, similar to pir:T13514 hypothetical protein 25 from Bacillus phage phi-105 (416 aa); 29.3% identity in 372 aa overlap.
       0.457
Your Current Organism:
Clostridium perfringens 13
NCBI taxonomy Id: 195102
Other names: C. perfringens str. 13, Clostridium perfringens str. 13
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.