STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CPE1229Conserved hypothetical protein; 410 aa, similar to prf:2015382A ORF 1 from Clostridium perfringens (80 aa); 60% identity in 75 aa overlap. Putative N-terminal signal sequence was found by PSORT. (410 aa)    
Predicted Functional Partners:
ftsX
Cell-division protein; Part of the ABC transporter FtsEX involved in asymmetric cellular division facilitating the initiation of sporulation. Belongs to the ABC-4 integral membrane protein family. FtsX subfamily.
 
  
 0.714
ftsE
Cell-division ATP-binding protein; Part of the ABC transporter FtsEX involved in cellular division.
 
  
 0.626
CPE0278
Conserved hypothetical protein; 432 aa, similar to gp:LMO250194_1 P45 from Listeria monocytogenes (401 aa); 26% identity in 388 aa overlap. Putative N-terminal signal sequence was found by PSORT.
 
  
0.589
CPE1504
Conserved hypothetical protein; 337 aa, similar to sp:YABE_BACSU HYPOTHETICAL 47.7 KDA PROTEIN IN METS-KSGA INTERGENIC REGION from Bacillus subtilis (437 aa); 33.8% identity in 305 aa overlap. 1 putative transmembrane region was found by PSORT.
 
  
0.589
CPE2519
Conserved hypothetical protein; 340 aa, similar to sp:YABE_BACSU HYPOTHETICAL 47.7 KDA PROTEIN IN METS-KSGA INTERGENIC REGION from Bacillus subtilis (437 aa); 36.9% identity in 301 aa overlap. Putative N-terminal signal sequence was found by PSORT.
 
  
0.557
CPE1231
Probable surface protein; 1129 aa, similar to pir:T30290 AAS surface protein from Staphylococcus saprophyticus (1463 aa); 25.4% identity in 764 aa overlap.Also similar to pir:T30211 autolysin E from Staphylococcus epidermidis; gp:AF192767_1 enterotoxin from Bacillus cereus. Putative N-terminal signal sequence was found by PSORT.
 
  
 0.501
CPE1614
441 aa, similar to gpu:AP001519_115 cell wall-binding protein from Bacillus halodurans (461 aa); 27.3% identity in 429 aa overlap. Putative N-terminal signal sequence was found by PSORT.
 
  
0.500
entD
Probable enterotoxin; 635 aa, multiple regions are similar to gp:AF192766_1 enterotoxin from Bacillus cereus (419 aa); 33.6% identity in 211 aa overlap. Also similar to many N-acetylmuramoyl-L alanine amidases. Putative N-terminal signal sequence was found by PSORT; CPE0606.
 
  
 0.494
CPE0747
Hypothetical protein; 1132 aa, C-terminal region is similar to pir:C69477 hypothetical protein AF1820 from Archaeoglobus fulgidus (791 aa); 23.4% identity in 538 aa overlap. Putative N-terminal signal sequence and 7 putative transmembrane regions were found by PSORT.
 
  
 0.463
entB
Probable enterotoxin; 549 aa, similar to gp:AF192766_1 enterotoxin from Bacillus cereus (419 aa); 23.7% identity in 375 aa overlap. Putative N-terminal signal sequence was found by PSORT; CPE1354.
 
  
 0.436
Your Current Organism:
Clostridium perfringens 13
NCBI taxonomy Id: 195102
Other names: C. perfringens str. 13, Clostridium perfringens str. 13
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