STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
entAProbable enterotoxin; 955 aa, similar to gp:AF192766_1 enterotoxin from Bacillus cereus (419 aa); 23.2% identity in 224 aa overlap; CPE1258. (955 aa)    
Predicted Functional Partners:
CPE1389
Probable GTP binding protein; Necessary for normal cell division and for the maintenance of normal septation; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. EngB GTPase family.
  
    0.709
entD
Probable enterotoxin; 635 aa, multiple regions are similar to gp:AF192766_1 enterotoxin from Bacillus cereus (419 aa); 33.6% identity in 211 aa overlap. Also similar to many N-acetylmuramoyl-L alanine amidases. Putative N-terminal signal sequence was found by PSORT; CPE0606.
 
  
0.706
entC
Probable enterotoxin; 625 aa, partially similar to gp:AF192766_1 enterotoxin from Bacillus cereus (419 aa); 31.5% identity in 130 aa overlap. Putative N-terminal signal sequence was found by PSORT; CPE0452.
 
   
 0.669
entB
Probable enterotoxin; 549 aa, similar to gp:AF192766_1 enterotoxin from Bacillus cereus (419 aa); 23.7% identity in 375 aa overlap. Putative N-terminal signal sequence was found by PSORT; CPE1354.
 
  
0.664
CPE1452
Conserved hypothetical protein; 342 aa, partially similar to sp:YQGP_BACSU HYPOTHETICAL 56.4 KDA PROTEIN IN SODA-COMGA INTERGENIC REGION. from Bacillus subtilis (507 aa); 43% identity in 151 aa overlap. 5 putative transmembrane regions were found by PSORT.
  
 
 0.641
CPE0278
Conserved hypothetical protein; 432 aa, similar to gp:LMO250194_1 P45 from Listeria monocytogenes (401 aa); 26% identity in 388 aa overlap. Putative N-terminal signal sequence was found by PSORT.
 
  
 0.632
CPE1231
Probable surface protein; 1129 aa, similar to pir:T30290 AAS surface protein from Staphylococcus saprophyticus (1463 aa); 25.4% identity in 764 aa overlap.Also similar to pir:T30211 autolysin E from Staphylococcus epidermidis; gp:AF192767_1 enterotoxin from Bacillus cereus. Putative N-terminal signal sequence was found by PSORT.
 
  
0.632
CPE0155
Conserved hypothetical protein; 723 aa, partially similar to gpu:AP001508_84 BH0361 gene product from Bacillus halodurans (1661 aa); 26.4% identity in 273 aa overlap.Also some similarity to sp:CNA_STAAU COLLAGEN ADHESIN PRECURSOR from Staphylococcus aureus. Putative N-terminal signal sequence and 1 putative transmembrane region were found by PSORT.
  
     0.566
CPE0747
Hypothetical protein; 1132 aa, C-terminal region is similar to pir:C69477 hypothetical protein AF1820 from Archaeoglobus fulgidus (791 aa); 23.4% identity in 538 aa overlap. Putative N-terminal signal sequence and 7 putative transmembrane regions were found by PSORT.
 
    0.545
spoVD
728 aa, similar to gpu:AP001516_1 stage V sporulation protein (soprulation specific penicillin-binding protein) (spore cortex) from Bacillus halodurans (644 aa); 38.6% identity in 360 aa overlap. Putative N-terminal signal sequence was found by PSORT; CPE0564.
  
  
 0.498
Your Current Organism:
Clostridium perfringens 13
NCBI taxonomy Id: 195102
Other names: C. perfringens str. 13, Clostridium perfringens str. 13
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