node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CPE1625 | CPE2160 | gene:10490889 | gene:10491430 | SWI/SNF family helicase; 1084 aa, similar to prf:2516401B SNF gene from Bacillus cereus (1064 aa); 34.4% identity in 868 aa overlap. | 380 aa, similar to pir:A69819 probable phosphoesterase (EC 3.1.-.-) yhaO from Bacillus subtilis (408 aa); 28% identity in 296 aa overlap. 1 putative transmembrane region was found by PSORT. | 0.439 |
CPE1625 | polA | gene:10490889 | gene:10491264 | SWI/SNF family helicase; 1084 aa, similar to prf:2516401B SNF gene from Bacillus cereus (1064 aa); 34.4% identity in 868 aa overlap. | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity. | 0.980 |
CPE1625 | recA | gene:10490889 | gene:10490937 | SWI/SNF family helicase; 1084 aa, similar to prf:2516401B SNF gene from Bacillus cereus (1064 aa); 34.4% identity in 868 aa overlap. | recA protein; Can catalyze the hydrolysis of ATP in the presence of single- stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage; Belongs to the RecA family. | 0.835 |
CPE1625 | recQ-2 | gene:10490889 | gene:10490598 | SWI/SNF family helicase; 1084 aa, similar to prf:2516401B SNF gene from Bacillus cereus (1064 aa); 34.4% identity in 868 aa overlap. | 592 aa, similar to pir:F69901 DNA helicase recQ from Bacillus subtilis (591 aa); 38% identity in 587 aa overlap; CPE1335. | 0.667 |
CPE1625 | sbcD | gene:10490889 | gene:10489463 | SWI/SNF family helicase; 1084 aa, similar to prf:2516401B SNF gene from Bacillus cereus (1064 aa); 34.4% identity in 868 aa overlap. | Probable exonuclease; SbcCD cleaves DNA hairpin structures. These structures can inhibit DNA replication and are intermediates in certain DNA recombination reactions. The complex acts as a 3'->5' double strand exonuclease that can open hairpins. It also has a 5' single-strand endonuclease activity; Belongs to the SbcD family. | 0.523 |
CPE1625 | topA | gene:10490889 | gene:10490966 | SWI/SNF family helicase; 1084 aa, similar to prf:2516401B SNF gene from Bacillus cereus (1064 aa); 34.4% identity in 868 aa overlap. | DNA topoisomerase I; Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA- (5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supe [...] | 0.473 |
CPE1625 | topB | gene:10490889 | gene:10490772 | SWI/SNF family helicase; 1084 aa, similar to prf:2516401B SNF gene from Bacillus cereus (1064 aa); 34.4% identity in 868 aa overlap. | DNA topoisomerase III; Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA- (5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA su [...] | 0.419 |
CPE1625 | topB-2 | gene:10490889 | gene:10491252 | SWI/SNF family helicase; 1084 aa, similar to prf:2516401B SNF gene from Bacillus cereus (1064 aa); 34.4% identity in 868 aa overlap. | 720 aa, similar to gp:AF192329_12 DNA topoisomerase III-like protein from Enterococcus faecalis (693 aa); 30.5% identity in 696 aa overlap; CPE1983. | 0.419 |
CPE2160 | CPE1625 | gene:10491430 | gene:10490889 | 380 aa, similar to pir:A69819 probable phosphoesterase (EC 3.1.-.-) yhaO from Bacillus subtilis (408 aa); 28% identity in 296 aa overlap. 1 putative transmembrane region was found by PSORT. | SWI/SNF family helicase; 1084 aa, similar to prf:2516401B SNF gene from Bacillus cereus (1064 aa); 34.4% identity in 868 aa overlap. | 0.439 |
CPE2160 | polA | gene:10491430 | gene:10491264 | 380 aa, similar to pir:A69819 probable phosphoesterase (EC 3.1.-.-) yhaO from Bacillus subtilis (408 aa); 28% identity in 296 aa overlap. 1 putative transmembrane region was found by PSORT. | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity. | 0.988 |
CPE2160 | recA | gene:10491430 | gene:10490937 | 380 aa, similar to pir:A69819 probable phosphoesterase (EC 3.1.-.-) yhaO from Bacillus subtilis (408 aa); 28% identity in 296 aa overlap. 1 putative transmembrane region was found by PSORT. | recA protein; Can catalyze the hydrolysis of ATP in the presence of single- stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage; Belongs to the RecA family. | 0.555 |
CPE2160 | recQ-2 | gene:10491430 | gene:10490598 | 380 aa, similar to pir:A69819 probable phosphoesterase (EC 3.1.-.-) yhaO from Bacillus subtilis (408 aa); 28% identity in 296 aa overlap. 1 putative transmembrane region was found by PSORT. | 592 aa, similar to pir:F69901 DNA helicase recQ from Bacillus subtilis (591 aa); 38% identity in 587 aa overlap; CPE1335. | 0.667 |
mutL | polA | gene:10490419 | gene:10491264 | DNA mismatch repair protein; This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a 'molecular matchmaker', a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex. | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity. | 0.979 |
mutL | recA | gene:10490419 | gene:10490937 | DNA mismatch repair protein; This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a 'molecular matchmaker', a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex. | recA protein; Can catalyze the hydrolysis of ATP in the presence of single- stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage; Belongs to the RecA family. | 0.710 |
mutL | recQ-2 | gene:10490419 | gene:10490598 | DNA mismatch repair protein; This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a 'molecular matchmaker', a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex. | 592 aa, similar to pir:F69901 DNA helicase recQ from Bacillus subtilis (591 aa); 38% identity in 587 aa overlap; CPE1335. | 0.692 |
mutL | sbcD | gene:10490419 | gene:10489463 | DNA mismatch repair protein; This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a 'molecular matchmaker', a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex. | Probable exonuclease; SbcCD cleaves DNA hairpin structures. These structures can inhibit DNA replication and are intermediates in certain DNA recombination reactions. The complex acts as a 3'->5' double strand exonuclease that can open hairpins. It also has a 5' single-strand endonuclease activity; Belongs to the SbcD family. | 0.423 |
mutL | topA | gene:10490419 | gene:10490966 | DNA mismatch repair protein; This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a 'molecular matchmaker', a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex. | DNA topoisomerase I; Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA- (5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supe [...] | 0.452 |
polA | CPE1625 | gene:10491264 | gene:10490889 | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity. | SWI/SNF family helicase; 1084 aa, similar to prf:2516401B SNF gene from Bacillus cereus (1064 aa); 34.4% identity in 868 aa overlap. | 0.980 |
polA | CPE2160 | gene:10491264 | gene:10491430 | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity. | 380 aa, similar to pir:A69819 probable phosphoesterase (EC 3.1.-.-) yhaO from Bacillus subtilis (408 aa); 28% identity in 296 aa overlap. 1 putative transmembrane region was found by PSORT. | 0.988 |
polA | mutL | gene:10491264 | gene:10490419 | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity. | DNA mismatch repair protein; This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a 'molecular matchmaker', a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex. | 0.979 |