STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CPE1463Probable PTS system; 275 aa, similar to sp:PTND_ECOLI PTS SYSTEM, MANNOSE-SPECIFIC IID COMPONENT (EIID-MAN) (MANNOSE-PERMEASE IID COMPONENT) (PHOSPHOTRANSFERASE ENZYME II, D COMPONENT) (EII-M-MAN) from Escherichia coli (286 aa); 34.8% identity in 247 aa overlap. 4 putative transmembrane regions were found by PSORT; mannose-specific IID component. (275 aa)    
Predicted Functional Partners:
CPE1464
Probable PTS system; 268 aa, similar to gp:VFU65015_2 PTS permease for mannose subunit IIPMan from Vibrio furnissii (258 aa); 30.3% identity in 221 aa overlap. Putative N-terminal signal sequence and 5 putative transmembrane regions were found by PSORT; mannose-specific IIC component.
 0.997
CPE1465
Probable PTS system; 165 aa, similar to pir:WQECM3 phosphotransferase system enzyme II (EC 2.7.1.69), mannose-specific, factor IIAB from Escherichia coli (323 aa); 30.2% identity in 139 aa overlap; mannose-specific IIAB component.
 
 0.996
CPE0821
PTS system; 326 aa, similar to gp:AF130465_1 mannose-specific phosphotransferase system component IIAB from Streptococcus salivarius (330 aa); 56.2% identity in 317 aa overlap; mannnose-specific IIAB component.
 
 0.993
CPE0322
Probable PTS system; 258 aa, similar to sp:PTNC_ECOLI PTS SYSTEM, MANNOSE-SPECIFIC IIC COMPONENT (EIIC-MAN) (MANNOSE-PERMEASE IIC COMPONENT) (PHOSPHOTRANSFERASE ENZYME II, C COMPONENT) (EII-P-MAN) from Escherichia coli (266 aa); 33.5% identity in 239 aa overlap. Putative N-terminal signal sequence and 6 putative transmembrane regions were found by PSORT; mannose-specific component IIC.
 0.991
CPE2631
Probable PTS system; 265 aa, similar to prf:2306373C mannose phosphotransferase:SUBUNIT=EII from Lactobacillus curvatus (270 aa); 30.8% identity in 240 aa overlap. Putative N-terminal signal sequence and 3 putative transmembrane regions were found by PSORT; mannose-specific enzyme IIC component.
 0.987
CPE1466
Probable PTS system; 139 aa, partially similar to gp:AF130465_1 mannose-specific phosphotransferase system component IIAB from Streptococcus salivarius (330 aa); 31.6% identity in 95 aa overlap. 1 putative transmembrane region was found by PSORT; mannose-specific IIAB component.
 
 0.982
CPE0822
PTS system; 267 aa, similar to gp:AF130465_2 mannose-specific phosphotransferase system component IIC [Streptococcus salivarius] from Streptococcus salivarius (271 aa); 42.1% identity in 126 aa overlap. Putative N-terminal signal sequence and 7 putative transmembrane regions were found by PSORT; mannnose-specific IIC component.
 0.981
CPE0320
Hypothetical protein; 145 aa, similar to N-terminal of gp:AF130465_1 mannose-specific phosphotransferase system component IIAB from Streptococcus salivarius (330 aa); 34.7% identity in 98 aa overlap. 1 putative transmembrane region was found by PSORT.
 
 0.976
CPE2629
Probable PTS system; 134 aa, similar to pir:WQECM3 phosphotransferase system enzyme II (EC 2.7.1.69), mannose-specific, factor IIAB from Escherichia coli (323 aa); 26.6% identity in 128 aa overlap; mannose-specific enzyme IIAB component.
 
 0.976
hpr
Phosphocarrier protein; 86 aa, similar to sp:PTHP_STAAU PHOSPHOCARRIER PROTEIN HPR (HISTIDINE-CONTAINING PROTEIN) from Staphylococcus aureus (88 aa); 56.5% identity in 69 aa overlap; CPE1669.
    
 0.940
Your Current Organism:
Clostridium perfringens 13
NCBI taxonomy Id: 195102
Other names: C. perfringens str. 13, Clostridium perfringens str. 13
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.