STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CPE1582273 aa, partially similar to pir:F75200 hypothetical protein PAB2261 from Pyrococcus abyssi (strain Orsay) (248 aa); 31.5% identity in 127 aa overlap. 5 putative transmembrane regions were found by PSORT. (273 aa)    
Predicted Functional Partners:
CPE1583
Probable ABC transporter; Probably part of an ABC transporter complex. Responsible for energy coupling to the transport system (By similarity).
 
 0.995
CPE2373
Probable ABC transporter; ATP-binding (A) component of a common energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates.
 0.970
CPE1584
Hypothetical protein; 185 aa, similar to gp:LLA012388_6 hypothetical protein from Lactococcus lactis (182 aa); 51.1% identity in 184 aa overlap. Putative N-terminal signal sequence and 3 putative transmembrane regions were found by PSORT.
 
 
 0.967
CPE2374
Probable ABC transporter; ATP-binding (A) component of a common energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates.
 
 0.959
bioY
Biotin synthase; 184 aa, similar to sp:BIOY_BACSH BIOY PROTEIN from Bacillus sphaericus (215 aa); 43.4% identity in 173 aa overlap. Putative N-terminal signal sequence and 4 putative transmembrane regions were found by PSORT; CPE1545.
  
 0.930
CPE2372
Conserved hypothetical protein; Transmembrane (T) component of an energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates.
  
  
 
0.906
cbiM
Probable cobalt transport protein; Part of the energy-coupling factor (ECF) transporter complex CbiMNOQ involved in cobalt import.
  
 
 0.829
cbiO
Probable cobalt transport ATP-binding protein O; Probably part of an ABC transporter complex. Responsible for energy coupling to the transport system (By similarity).
 
 
 0.800
CPE1421
Hypothetical protein; 250 aa, partially similar to gp:BAMALAMYA_3 membrane protein from Bacillus acidopullulyticus (183 aa); 26.4% identity in 239 aa overlap. Putative N-terminal signal sequence and 5 putative transmembrane regions were found by PSORT.
   
 
 0.670
CPE1173
Hypothetical protein; 142 aa, partially similar to pir:A71195 hypothetical protein PH1832 from Pyrococcus horikoshii (202 aa); 32.4% identity in 111 aa overlap. Putative N-terminal signal sequence and 2 putative transmembrane regions were found by PSORT.
  
 
 0.648
Your Current Organism:
Clostridium perfringens 13
NCBI taxonomy Id: 195102
Other names: C. perfringens str. 13, Clostridium perfringens str. 13
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