STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
spoIIIAH165 aa, similar to sp:S3AH_BACSU STAGE III SPORULATION PROTEIN AH from Bacillus subtilis (218 aa); 22.4% identity in 143 aa overlap. Putative N-terminal signal sequence was found by PSORT; CPE1826. (165 aa)    
Predicted Functional Partners:
spoIIIAG
Stage III sporulation protein AG; 194 aa, similar to pir:B69712 mutants block sporulation after engulfment spoIIIAG from Bacillus subtilis (229 aa); 28% identity in 157 aa overlap. Putative N-terminal signal sequence was found by PSORT; CPE1827.
 
  
 0.995
spoIIIAA
294 aa, similar to sp:S3AA_BACSU STAGE III SPORULATION PROTEIN AA from Bacillus subtilis (307 aa); 40.3% identity in 293 aa overlap; CPE1833.
  
  
 0.918
spoIIIAE
Stage III sporulation protein AE; 390 aa, similar to gpu:AP001516_222 mutants block sporulation after engulfment from Bacillus halodurans (397 aa); 26.4% identity in 333 aa overlap. Putative N-terminal signal sequence and 9 putative transmembrane regions were found by PSORT; CPE1829.
 
  
 0.860
spoIIP
361 aa, similar to gpu:AP001513_176 stage II sporulation protein P from Bacillus halodurans (377 aa); 31.9% identity in 204 aa overlap. Putative N-terminal signal sequence was found by PSORT; CPE2040.
  
   
 0.777
spoIIIAC
65 aa, similar to sp:S3AC_BACSU STAGE III SPORULATION PROTEIN AC from Bacillus subtilis (68 aa); 49.2% identity in 63 aa overlap. Putative N-terminal signal sequence and 1 putative transmembrane region were found by PSORT; CPE1831.
 
  
 0.751
spoIIIAB
Stage III sporulation protein AB; 171 aa, similar to gpu:AP001516_225 mutants block sporulation after engulfment from Bacillus halodurans (170 aa); 34.5% identity in 145 aa overlap. Putative N-terminal signal sequence and 1 putative transmembrane region were found by PSORT; CPE1832.
  
  
 0.749
spoIIID
83 aa, similar to sp:SP3D_BACSU STAGE III SPORULATION PROTEIN D (14 KDA TRANSCRIPTION FACTOR) from Bacillus subtilis (93 aa); 61.3% identity in 80 aa overlap; CPE2181.
  
  
 0.723
CPE1825
Probable alkaline-shock protein; 129 aa, similar to sp:YQHY_BACSU HYPOTHETICAL 14.7 KDA PROTEIN IN ACCC-FOLD INTERGENIC REGION from Bacillus subtilis (135 aa); 40.7% identity in 113 aa overlap. Also similar to pir:JC2527 alkaline shock protein from Staphylococcus aureus. 2 putative transmembrane regions were found by PSORT.
  
    0.722
spoIIIAD
128 aa, similar to sp:S3AD_BACSU STAGE III SPORULATION PROTEIN AD from Bacillus subtilis (133 aa); 34% identity in 103 aa overlap. S.D. unclear. Putative N-terminal signal sequence and 3 putative transmembrane regions were found by PSORT; CPE1830.
  
  
 0.712
CPE2476
Hypothetical protein; 124 aa, similar to sp:YABQ_BACSU HYPOTHETICAL 25.1 KDA PROTEIN IN MFD-DIVIC INTERGENIC REGION from Bacillus subtilis (211 aa); 30.6% identity in 121 aa overlap. Putative N-terminal signal sequence and 2 putative transmembrane regions were found by PSORT.
  
     0.707
Your Current Organism:
Clostridium perfringens 13
NCBI taxonomy Id: 195102
Other names: C. perfringens str. 13, Clostridium perfringens str. 13
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