STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CPE1869Conserved hypothetical protein; 428 aa, similar to C-terminal region of gp:AF169324_12 BcbC from Pasteurella multocida (1033 aa); 27% identity in 244 aa overlap. (428 aa)    
Predicted Functional Partners:
CPE1871
215 aa, similar to sp:Y263_METJA HYPOTHETICAL PROTEIN MJ0263 from Methanococcus jannaschii (320 aa); 23.4% identity in 201 aa overlap. ATA start.
 
 
 0.914
tagA
Probable teichoic acid biosynthesis protein A; Catalyzes the conversion of GlcNAc-PP-undecaprenol into ManNAc-GlcNAc-PP-undecaprenol, the first committed lipid intermediate in the de novo synthesis of teichoic acid.
  
 
 0.819
CPE1868
Formiminotransferase cyclodeaminase-related protein; 211 aa, similar to sp:SCE4_METEX PUTATIVE SERINE CYCLE ENZYME (ORF4) from Methylobacterium extorquens (208 aa); 30% identity in 200 aa overlap. 2 putative transmembrane regions were found by PSORT.
  
    0.818
CPE1666
Hypothetical protein; 204 aa, partially similar to gp:AE002349_1 DNA polymerase III, epsilon subunit, putative from Chlamydia muridarum (250 aa); 31.5% identity in 111 aa overlap.
  
 
   0.767
CPE1920
Hypothetical protein; 116 aa, no significant homology.
  
     0.733
CPE1451
Hypothetical protein; 323 aa, similar to pir:G69161 conserved hypothetical protein MTH471 from Methanobacterium thermoautotrophicum (strain Delta H) (138 aa); 24.8% identity in 105 aa overlap. 3 putative transmembrane regions were found by PSORT.
  
     0.732
CPE1872
Hypothetical protein; 144 aa, no significant homology.
  
 
 0.724
CPE2516
Hypothetical protein; 540 aa, no significant homology.
  
    0.721
CPE1679
Hypothetical protein; 91 aa, similar to gpu:AP001515_138 BH2404 gene product from Bacillus halodurans (82 aa); 33.3% identity in 75 aa overlap.
  
     0.718
CPE2233
Hypothetical protein; 210 aa, no significant homology.
  
     0.706
Your Current Organism:
Clostridium perfringens 13
NCBI taxonomy Id: 195102
Other names: C. perfringens str. 13, Clostridium perfringens str. 13
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.