STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CPE2343Probable maltose ABC transporter; 408 aa, similar to gp:AAC252161_1 maltose binding protein from Alicyclobacillus acidocaldarius (427 aa); 41.7% identity in 405 aa overlap; maltose-binding protein. (408 aa)    
Predicted Functional Partners:
CPE2341
Probable maltose ABC transporter; 297 aa, similar to gp:AAC252161_3 putative maltose transport membrane protein from Alicyclobacillus acidocaldarius (301 aa); 41.6% identity in 296 aa overlap. 6 putative transmembrane regions were found by PSORT; permease protein.
 
 0.999
CPE2342
Probable maltose ABC transporter; 317 aa, similar to gp:AAC252161_2 putative maltose transport membrane protein from Alicyclobacillus acidocaldarius (321 aa); 39.4% identity in 307 aa overlap. 5 putative transmembrane regions were found by PSORT; permease protein.
 0.998
CPE2345
Probable maltose ABC transportor; 369 aa, similar to gp:AB035092_5 Orf5 from Clostridium perfringen (369 aa); 98.6% identity in 369 aa overlap; ATP-binding protein; Belongs to the ABC transporter superfamily.
 
 0.990
CPE0372
Probable ABC transporter; 308 aa, similar to gpu:AP001513_138 sugar transport system (permease) (binding protein dependent transporter) from Bacillus halodurans (309 aa); 35.1% identity in 291 aa overlap. 6 putative transmembrane regions were found by PSORT; permease.
 
 0.914
CPE0577
Probable ABC transporter; 311 aa, similar to sp:YURN_BACSU HYPOTHETICAL ABC TRANSPORTER PERMEASE PROTEIN YURN from Bacillus subtilis (292 aa); 35.6% identity in 267 aa overlap. Putative N-terminal signal sequence and 5 putative transmembrane regions were found by PSORT; permease.
 
 
 0.908
pulB
Pullulanase; 1064 aa, similar to sp:PULA_THEMA PULLULANASE PRECURSOR (EC 3.2.1.41) (ALPHA-DEXTRIN ENDO-1,6-ALPHA-GLUCOSIDASE) (PULLULAN 6-GLUCANOHYDROLASE) from Thermotoga maritima (strain MSB8) (843 aa); 37.1% identity in 832 aa overlap; CPE1587; Belongs to the glycosyl hydrolase 13 family.
 
  
 0.775
malQ
4-alpha-glucanotransferase; 497 aa, similar to sp:MALQ_CLOBU 4-ALPHA-GLUCANOTRANSFERASE (EC 2.4.1.25) (AMYLOMALTASE) (DISPROPORTIONATING ENZYME) (D-ENZYME) from (487 aa); 64.3% identity in 484 aa overlap; CPE2338.
  
  
 0.697
CPE0805
Cyclomaltodextrinase; 610 aa, similar to pir:S63617 cymH protein from Klebsiella oxytoca (598 aa); 54.7% identity in 563 aa overlap; Belongs to the glycosyl hydrolase 13 family.
 
  
 0.695
CPE2569
Probable glutamine synthetase; 633 aa, similar to prf:1407183A Gln synthetase from Clostridium acetobutylicum (443 aa); 30.3% identity in 426 aa overlap. S.D. unclear.
    
 
 0.619
CPE0880
Hypothetical protein; 251 aa, no significant homology. 4 putative transmembrane regions were found by PSORT.
  
  
 0.608
Your Current Organism:
Clostridium perfringens 13
NCBI taxonomy Id: 195102
Other names: C. perfringens str. 13, Clostridium perfringens str. 13
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