CPF_0055 protein (Clostridium perfringens ATCC 13124)

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Score

CPF_0055

Conserved hypothetical protein; Identified by similarity to GB:AAM23356.1. (92 aa)

Predicted Functional Partners:

bofA

0.797

recR

0.562

CPF_0053

0.475

dnaX

0.418

Your Current Organism:

Clostridium perfringens ATCC 13124

NCBI taxonomy Id: 195103
Other names: C. perfringens ATCC 13124, Clostridium perfringens str. ATCC 13124, Clostridium perfringens strain ATCC 13124

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CPF_0053	CPF_0055	CPF_0053	CPF_0055	Conserved hypothetical protein TIGR00103; Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection.	Conserved hypothetical protein; Identified by similarity to GB:AAM23356.1.	0.475
CPF_0053	bofA	CPF_0053	CPF_0056	Conserved hypothetical protein TIGR00103; Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection.	sigma-K factor processing regulatory protein BofA; Identified by similarity to GB:BAB79755.1; match to protein family HMM PF07441; match to protein family HMM TIGR02862.	0.499
CPF_0053	dnaX	CPF_0053	CPF_0052	Conserved hypothetical protein TIGR00103; Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection.	DNA polymerase III, gamma and tau subunits; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity.	0.827
CPF_0053	recR	CPF_0053	CPF_0054	Conserved hypothetical protein TIGR00103; Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection.	Recombination protein RecR; May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO.	0.976
CPF_0055	CPF_0053	CPF_0055	CPF_0053	Conserved hypothetical protein; Identified by similarity to GB:AAM23356.1.	Conserved hypothetical protein TIGR00103; Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection.	0.475
CPF_0055	bofA	CPF_0055	CPF_0056	Conserved hypothetical protein; Identified by similarity to GB:AAM23356.1.	sigma-K factor processing regulatory protein BofA; Identified by similarity to GB:BAB79755.1; match to protein family HMM PF07441; match to protein family HMM TIGR02862.	0.797
CPF_0055	dnaX	CPF_0055	CPF_0052	Conserved hypothetical protein; Identified by similarity to GB:AAM23356.1.	DNA polymerase III, gamma and tau subunits; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity.	0.418
CPF_0055	recR	CPF_0055	CPF_0054	Conserved hypothetical protein; Identified by similarity to GB:AAM23356.1.	Recombination protein RecR; May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO.	0.562
bofA	CPF_0053	CPF_0056	CPF_0053	sigma-K factor processing regulatory protein BofA; Identified by similarity to GB:BAB79755.1; match to protein family HMM PF07441; match to protein family HMM TIGR02862.	Conserved hypothetical protein TIGR00103; Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection.	0.499
bofA	CPF_0055	CPF_0056	CPF_0055	sigma-K factor processing regulatory protein BofA; Identified by similarity to GB:BAB79755.1; match to protein family HMM PF07441; match to protein family HMM TIGR02862.	Conserved hypothetical protein; Identified by similarity to GB:AAM23356.1.	0.797
bofA	dnaX	CPF_0056	CPF_0052	sigma-K factor processing regulatory protein BofA; Identified by similarity to GB:BAB79755.1; match to protein family HMM PF07441; match to protein family HMM TIGR02862.	DNA polymerase III, gamma and tau subunits; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity.	0.449
bofA	recR	CPF_0056	CPF_0054	sigma-K factor processing regulatory protein BofA; Identified by similarity to GB:BAB79755.1; match to protein family HMM PF07441; match to protein family HMM TIGR02862.	Recombination protein RecR; May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO.	0.575
dnaX	CPF_0053	CPF_0052	CPF_0053	DNA polymerase III, gamma and tau subunits; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity.	Conserved hypothetical protein TIGR00103; Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection.	0.827
dnaX	CPF_0055	CPF_0052	CPF_0055	DNA polymerase III, gamma and tau subunits; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity.	Conserved hypothetical protein; Identified by similarity to GB:AAM23356.1.	0.418
dnaX	bofA	CPF_0052	CPF_0056	DNA polymerase III, gamma and tau subunits; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity.	sigma-K factor processing regulatory protein BofA; Identified by similarity to GB:BAB79755.1; match to protein family HMM PF07441; match to protein family HMM TIGR02862.	0.449
dnaX	recR	CPF_0052	CPF_0054	DNA polymerase III, gamma and tau subunits; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity.	Recombination protein RecR; May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO.	0.814
recR	CPF_0053	CPF_0054	CPF_0053	Recombination protein RecR; May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO.	Conserved hypothetical protein TIGR00103; Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection.	0.976
recR	CPF_0055	CPF_0054	CPF_0055	Recombination protein RecR; May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO.	Conserved hypothetical protein; Identified by similarity to GB:AAM23356.1.	0.562
recR	bofA	CPF_0054	CPF_0056	Recombination protein RecR; May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO.	sigma-K factor processing regulatory protein BofA; Identified by similarity to GB:BAB79755.1; match to protein family HMM PF07441; match to protein family HMM TIGR02862.	0.575
recR	dnaX	CPF_0054	CPF_0052	Recombination protein RecR; May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO.	DNA polymerase III, gamma and tau subunits; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity.	0.814