CPF_0238 protein (Clostridium perfringens ATCC 13124)

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CPF_0238

GGDEF/EAL domain protein; Identified by match to protein family HMM PF00563; match to protein family HMM PF00990; match to protein family HMM TIGR00254. (775 aa)

Predicted Functional Partners:

CPF_1164

0.885

CPF_2043

0.877

CPF_1220

0.874

CPF_1264

0.733

spoIIAB

0.684

CPF_0908

0.673

CPF_1243

0.649

CPF_0801

0.594

CPF_1064

0.553

CPF_0106

0.528

Your Current Organism:

Clostridium perfringens ATCC 13124

NCBI taxonomy Id: 195103
Other names: C. perfringens ATCC 13124, Clostridium perfringens str. ATCC 13124, Clostridium perfringens strain ATCC 13124

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CPF_0106	CPF_0238	CPF_0106	CPF_0238	Putative thiazole biosynthesis protein ThiH; Identified by match to protein family HMM PF04055; match to protein family HMM PF06968.	GGDEF/EAL domain protein; Identified by match to protein family HMM PF00563; match to protein family HMM PF00990; match to protein family HMM TIGR00254.	0.528
CPF_0106	CPF_1264	CPF_0106	CPF_1264	Putative thiazole biosynthesis protein ThiH; Identified by match to protein family HMM PF04055; match to protein family HMM PF06968.	Putative diguanylate cyclase; Identified by similarity to GB:AAC61683.1; match to protein family HMM PF00563; match to protein family HMM PF00990; match to protein family HMM TIGR00254.	0.528
CPF_0106	spoIIAB	CPF_0106	CPF_2306	Putative thiazole biosynthesis protein ThiH; Identified by match to protein family HMM PF04055; match to protein family HMM PF06968.	Anti-sigma F factor; Binds to sigma F and blocks its ability to form an RNA polymerase holoenzyme (E-sigma F). Phosphorylates SpoIIAA on a serine residue. This phosphorylation may enable SpoIIAA to act as an anti- anti-sigma factor that counteracts SpoIIAB and thus releases sigma F from inhibition.	0.621
CPF_0238	CPF_0106	CPF_0238	CPF_0106	GGDEF/EAL domain protein; Identified by match to protein family HMM PF00563; match to protein family HMM PF00990; match to protein family HMM TIGR00254.	Putative thiazole biosynthesis protein ThiH; Identified by match to protein family HMM PF04055; match to protein family HMM PF06968.	0.528
CPF_0238	CPF_0801	CPF_0238	CPF_0801	GGDEF/EAL domain protein; Identified by match to protein family HMM PF00563; match to protein family HMM PF00990; match to protein family HMM TIGR00254.	Sensory box protein/histidinol phosphate phosphatase family protein; Identified by similarity to SP:O34411; match to protein family HMM PF00990; match to protein family HMM PF02811; match to protein family HMM PF08448; match to protein family HMM TIGR00229; match to protein family HMM TIGR00254; match to protein family HMM TIGR01856.	0.594
CPF_0238	CPF_0908	CPF_0238	CPF_0908	GGDEF/EAL domain protein; Identified by match to protein family HMM PF00563; match to protein family HMM PF00990; match to protein family HMM TIGR00254.	EAL domain protein; Identified by match to protein family HMM PF00563.	0.673
CPF_0238	CPF_1064	CPF_0238	CPF_1064	GGDEF/EAL domain protein; Identified by match to protein family HMM PF00563; match to protein family HMM PF00990; match to protein family HMM TIGR00254.	EAL domain protein; Identified by similarity to SP:P32701; match to protein family HMM PF00563.	0.553
CPF_0238	CPF_1164	CPF_0238	CPF_1164	GGDEF/EAL domain protein; Identified by match to protein family HMM PF00563; match to protein family HMM PF00990; match to protein family HMM TIGR00254.	Putative sensory box-containing diguanylate cyclase; Identified by match to protein family HMM PF00990; match to protein family HMM PF01966; match to protein family HMM PF08448; match to protein family HMM TIGR00229; match to protein family HMM TIGR00254.	0.885
CPF_0238	CPF_1220	CPF_0238	CPF_1220	GGDEF/EAL domain protein; Identified by match to protein family HMM PF00563; match to protein family HMM PF00990; match to protein family HMM TIGR00254.	GGDEF domain protein; Identified by match to protein family HMM PF00990; match to protein family HMM TIGR00254.	0.874
CPF_0238	CPF_1243	CPF_0238	CPF_1243	GGDEF/EAL domain protein; Identified by match to protein family HMM PF00563; match to protein family HMM PF00990; match to protein family HMM TIGR00254.	Sensory box histidine kinase; Identified by match to protein family HMM PF00512; match to protein family HMM PF00989; match to protein family HMM PF02518; match to protein family HMM PF08447; match to protein family HMM PF08448; match to protein family HMM TIGR00229.	0.649
CPF_0238	CPF_1264	CPF_0238	CPF_1264	GGDEF/EAL domain protein; Identified by match to protein family HMM PF00563; match to protein family HMM PF00990; match to protein family HMM TIGR00254.	Putative diguanylate cyclase; Identified by similarity to GB:AAC61683.1; match to protein family HMM PF00563; match to protein family HMM PF00990; match to protein family HMM TIGR00254.	0.733
CPF_0238	CPF_2043	CPF_0238	CPF_2043	GGDEF/EAL domain protein; Identified by match to protein family HMM PF00563; match to protein family HMM PF00990; match to protein family HMM TIGR00254.	GGDEF domain protein; Identified by match to protein family HMM PF00990; match to protein family HMM TIGR00254.	0.877
CPF_0238	spoIIAB	CPF_0238	CPF_2306	GGDEF/EAL domain protein; Identified by match to protein family HMM PF00563; match to protein family HMM PF00990; match to protein family HMM TIGR00254.	Anti-sigma F factor; Binds to sigma F and blocks its ability to form an RNA polymerase holoenzyme (E-sigma F). Phosphorylates SpoIIAA on a serine residue. This phosphorylation may enable SpoIIAA to act as an anti- anti-sigma factor that counteracts SpoIIAB and thus releases sigma F from inhibition.	0.684
CPF_0801	CPF_0238	CPF_0801	CPF_0238	Sensory box protein/histidinol phosphate phosphatase family protein; Identified by similarity to SP:O34411; match to protein family HMM PF00990; match to protein family HMM PF02811; match to protein family HMM PF08448; match to protein family HMM TIGR00229; match to protein family HMM TIGR00254; match to protein family HMM TIGR01856.	GGDEF/EAL domain protein; Identified by match to protein family HMM PF00563; match to protein family HMM PF00990; match to protein family HMM TIGR00254.	0.594
CPF_0801	CPF_0908	CPF_0801	CPF_0908	Sensory box protein/histidinol phosphate phosphatase family protein; Identified by similarity to SP:O34411; match to protein family HMM PF00990; match to protein family HMM PF02811; match to protein family HMM PF08448; match to protein family HMM TIGR00229; match to protein family HMM TIGR00254; match to protein family HMM TIGR01856.	EAL domain protein; Identified by match to protein family HMM PF00563.	0.900
CPF_0801	CPF_1064	CPF_0801	CPF_1064	Sensory box protein/histidinol phosphate phosphatase family protein; Identified by similarity to SP:O34411; match to protein family HMM PF00990; match to protein family HMM PF02811; match to protein family HMM PF08448; match to protein family HMM TIGR00229; match to protein family HMM TIGR00254; match to protein family HMM TIGR01856.	EAL domain protein; Identified by similarity to SP:P32701; match to protein family HMM PF00563.	0.953
CPF_0801	CPF_1164	CPF_0801	CPF_1164	Sensory box protein/histidinol phosphate phosphatase family protein; Identified by similarity to SP:O34411; match to protein family HMM PF00990; match to protein family HMM PF02811; match to protein family HMM PF08448; match to protein family HMM TIGR00229; match to protein family HMM TIGR00254; match to protein family HMM TIGR01856.	Putative sensory box-containing diguanylate cyclase; Identified by match to protein family HMM PF00990; match to protein family HMM PF01966; match to protein family HMM PF08448; match to protein family HMM TIGR00229; match to protein family HMM TIGR00254.	0.702
CPF_0801	CPF_1220	CPF_0801	CPF_1220	Sensory box protein/histidinol phosphate phosphatase family protein; Identified by similarity to SP:O34411; match to protein family HMM PF00990; match to protein family HMM PF02811; match to protein family HMM PF08448; match to protein family HMM TIGR00229; match to protein family HMM TIGR00254; match to protein family HMM TIGR01856.	GGDEF domain protein; Identified by match to protein family HMM PF00990; match to protein family HMM TIGR00254.	0.438
CPF_0801	CPF_1243	CPF_0801	CPF_1243	Sensory box protein/histidinol phosphate phosphatase family protein; Identified by similarity to SP:O34411; match to protein family HMM PF00990; match to protein family HMM PF02811; match to protein family HMM PF08448; match to protein family HMM TIGR00229; match to protein family HMM TIGR00254; match to protein family HMM TIGR01856.	Sensory box histidine kinase; Identified by match to protein family HMM PF00512; match to protein family HMM PF00989; match to protein family HMM PF02518; match to protein family HMM PF08447; match to protein family HMM PF08448; match to protein family HMM TIGR00229.	0.490
CPF_0801	CPF_1264	CPF_0801	CPF_1264	Sensory box protein/histidinol phosphate phosphatase family protein; Identified by similarity to SP:O34411; match to protein family HMM PF00990; match to protein family HMM PF02811; match to protein family HMM PF08448; match to protein family HMM TIGR00229; match to protein family HMM TIGR00254; match to protein family HMM TIGR01856.	Putative diguanylate cyclase; Identified by similarity to GB:AAC61683.1; match to protein family HMM PF00563; match to protein family HMM PF00990; match to protein family HMM TIGR00254.	0.841

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