Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
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textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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CPF_0243Putative protein-tyrosine-phosphatase; Identified by similarity to SP:Q54518; match to protein family HMM PF02811. (257 aa)    
Predicted Functional Partners:
CPF_0464
Capsule chain length determinant protein; Identified by match to protein family HMM PF02706.
 
 
 0.919
CPF_0918
Capsule chain length determinant protein; Identified by match to protein family HMM PF02706.
 
 
 0.919
CPF_0465
Capsular polysaccharide biosynthesis protein; Identified by match to protein family HMM TIGR01007.
  
 0.917
CPF_0919
Tyrosine-protein kinase protein; Identified by similarity to SP:P39851; match to protein family HMM TIGR01007.
  
 0.917
CPF_0466
Capsular polysaccharide biosynthesis protein; Identified by match to protein family HMM PF02397.
  
  
 0.451
CPF_0910
Capsular polysaccharide biosynthesis protein; Identified by similarity to SP:P39853; match to protein family HMM PF00106; match to protein family HMM PF01073; match to protein family HMM PF01370; match to protein family HMM PF02719; match to protein family HMM PF04321; match to protein family HMM PF07993.
 
  
 0.449
CPF_0914
Capsular polysaccharide biosynthesis protein; Identified by match to protein family HMM PF00534.
 
  
 0.420
CPF_0242
Hypothetical protein; Identified by glimmer; putative.
       0.414
CPF_0244
Putative lipoprotein.
       0.402
Your Current Organism:
Clostridium perfringens ATCC 13124
NCBI taxonomy Id: 195103
Other names: C. perfringens ATCC 13124, Clostridium perfringens str. ATCC 13124, Clostridium perfringens strain ATCC 13124
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