Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CPF_0265Glycosyl transferase, group 1 family protein; Identified by match to protein family HMM PF00534. (427 aa)    
Predicted Functional Partners:
CPF_0264
ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005.
 
 
 0.819
CPF_0267
ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005.
 
 
 0.783
CPF_0263
ABC-2 type transporter, permease protein; Identified by match to protein family HMM PF01061.
  
  
 0.759
CPF_0266
Glycosyl transferase, group 1 family protein; Identified by match to protein family HMM PF00534.
 
    
0.756
glgB
1,4-alpha-glucan branching enzyme; Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position; Belongs to the glycosyl hydrolase 13 family. GlgB subfamily.
   
 0.565
CPF_0268
Glycosyl transferase, group 1 family protein; Identified by match to protein family HMM PF00534.
 
    
0.545
Your Current Organism:
Clostridium perfringens ATCC 13124
NCBI taxonomy Id: 195103
Other names: C. perfringens ATCC 13124, Clostridium perfringens str. ATCC 13124, Clostridium perfringens strain ATCC 13124
Server load: low (14%) [HD]