Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| CPF_0279 | CPF_0280 | CPF_0279 | CPF_0280 | Putative aldose 1-epimerase; Identified by match to protein family HMM PF01263. | Putative transcriptional regulator; Identified by match to protein family HMM PF03816; match to protein family HMM TIGR00350. | 0.515 |
| CPF_0279 | CPF_0281 | CPF_0279 | CPF_0281 | Putative aldose 1-epimerase; Identified by match to protein family HMM PF01263. | Identified by match to protein family HMM PF03631; match to protein family HMM TIGR00765; Belongs to the UPF0761 family. | 0.499 |
| CPF_0280 | CPF_0279 | CPF_0280 | CPF_0279 | Putative transcriptional regulator; Identified by match to protein family HMM PF03816; match to protein family HMM TIGR00350. | Putative aldose 1-epimerase; Identified by match to protein family HMM PF01263. | 0.515 |
| CPF_0280 | CPF_0281 | CPF_0280 | CPF_0281 | Putative transcriptional regulator; Identified by match to protein family HMM PF03816; match to protein family HMM TIGR00350. | Identified by match to protein family HMM PF03631; match to protein family HMM TIGR00765; Belongs to the UPF0761 family. | 0.516 |
| CPF_0280 | codY | CPF_0280 | CPF_1955 | Putative transcriptional regulator; Identified by match to protein family HMM PF03816; match to protein family HMM TIGR00350. | GTP-sensing transcriptional pleiotropic repressor CodY; DNA-binding protein that represses the expression of many genes that are induced as cells make the transition from rapid exponential growth to stationary phase. It is a GTP-binding protein that senses the intracellular GTP concentration as an indicator of nutritional limitations. At low GTP concentration it no longer binds GTP and stop to act as a transcriptional repressor; Belongs to the CodY family. | 0.437 |
| CPF_0281 | CPF_0279 | CPF_0281 | CPF_0279 | Identified by match to protein family HMM PF03631; match to protein family HMM TIGR00765; Belongs to the UPF0761 family. | Putative aldose 1-epimerase; Identified by match to protein family HMM PF01263. | 0.499 |
| CPF_0281 | CPF_0280 | CPF_0281 | CPF_0280 | Identified by match to protein family HMM PF03631; match to protein family HMM TIGR00765; Belongs to the UPF0761 family. | Putative transcriptional regulator; Identified by match to protein family HMM PF03816; match to protein family HMM TIGR00350. | 0.516 |
| codY | CPF_0280 | CPF_1955 | CPF_0280 | GTP-sensing transcriptional pleiotropic repressor CodY; DNA-binding protein that represses the expression of many genes that are induced as cells make the transition from rapid exponential growth to stationary phase. It is a GTP-binding protein that senses the intracellular GTP concentration as an indicator of nutritional limitations. At low GTP concentration it no longer binds GTP and stop to act as a transcriptional repressor; Belongs to the CodY family. | Putative transcriptional regulator; Identified by match to protein family HMM PF03816; match to protein family HMM TIGR00350. | 0.437 |