STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ftsEPutative cell division ATP-binding protein FtsE; Part of the ABC transporter FtsEX involved in cellular division. (228 aa)    
Predicted Functional Partners:
CPF_0297
Putative cell division protein; Part of the ABC transporter FtsEX involved in asymmetric cellular division facilitating the initiation of sporulation. Belongs to the ABC-4 integral membrane protein family. FtsX subfamily.
 
 0.998
CPF_1791
ABC transporter, permease protein; Identified by match to protein family HMM PF02687.
   
 0.892
CPF_1867
Identified by match to protein family HMM PF01551.
 
  
 0.741
CPF_0703
ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005.
    
0.730
CPF_0299
Putative membrane protein.
  
  
 0.728
CPF_0298
Carboxyl-terminal protease; Identified by match to protein family HMM PF00595; match to protein family HMM PF03572; match to protein family HMM TIGR00225; Belongs to the peptidase S41A family.
       0.661
ftsZ
Cell division protein FtsZ; Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity.
  
 
 0.645
CPF_0274
SagA protein; Identified by similarity to GB:AAF86217.1; match to protein family HMM PF00877.
 
  
 0.639
CPF_1437
3D domain protein; Identified by match to protein family HMM PF06725.
 
  
 0.618
CPF_0295
Putative membrane protein; Identified by match to protein family HMM PF02588.
       0.591
Your Current Organism:
Clostridium perfringens ATCC 13124
NCBI taxonomy Id: 195103
Other names: C. perfringens ATCC 13124, Clostridium perfringens str. ATCC 13124, Clostridium perfringens strain ATCC 13124
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