Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
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Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
CPF_0411Oxidoreductase, FAD-binding; Identified by match to protein family HMM PF01266; match to protein family HMM PF04324. (473 aa)    
Predicted Functional Partners:
CPF_0412
Pyridine nucleotide-disulphide oxidoreductase; Identified by match to protein family HMM PF07992.
    0.951
CPF_2874
Oxidoreductase, pyridine nucleotide-disulphide family; Identified by match to protein family HMM PF00070; match to protein family HMM PF07992.
    0.919
CPF_2875
FAD-dependent oxidoreductase; Identified by match to protein family HMM PF01266; match to protein family HMM PF04324.
  
  
 
0.905
gpsA
NAD-dependent glycerol-3-phosphate dehydrogenase family protein; Identified by similarity to SP:P46919; match to protein family HMM PF01210; match to protein family HMM PF03721; match to protein family HMM PF03807; match to protein family HMM PF07479; Belongs to the NAD-dependent glycerol-3-phosphate dehydrogenase family.
    
  0.903
CPF_2499
Oxidoreductase, pyridine nucleotide-disulphide family; Identified by match to protein family HMM PF00070; match to protein family HMM PF07992.
    0.874
CPF_2873
Conserved hypothetical protein; Identified by similarity to PIR:B97063; match to protein family HMM PF07892.
 
    0.856
plsD
Sn-glycerol-3-phosphate acyltransferase; Identified by similarity to GB:AAC46006.1; match to protein family HMM PF01553.
    
 0.808
CPF_1671
Putative 1-acyl-sn-glycerol-3-phosphate acyltransferase; Identified by match to protein family HMM PF01553; match to protein family HMM TIGR00530; Belongs to the 1-acyl-sn-glycerol-3-phosphate acyltransferase family.
    
 0.808
CPF_2274
Identified by similarity to SP:P19638; match to protein family HMM PF01219; match to protein family HMM PF01569.
     
  0.800
glpP
Glycerol uptake operon antiterminator; Identified by similarity to SP:P30300; match to protein family HMM PF04309.
 
     0.653
Your Current Organism:
Clostridium perfringens ATCC 13124
NCBI taxonomy Id: 195103
Other names: C. perfringens ATCC 13124, Clostridium perfringens str. ATCC 13124, Clostridium perfringens strain ATCC 13124
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