CPF_0484 protein (Clostridium perfringens ATCC 13124)

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CPF_0484

Putative RNA polymerase sigma factor; Identified by similarity to SP:P17869; match to protein family HMM TIGR02937. (215 aa)

Predicted Functional Partners:

rpoB

0.537

CPF_1098

0.532

rpoC

0.523

rpoA

0.492

galU

0.401

Your Current Organism:

Clostridium perfringens ATCC 13124

NCBI taxonomy Id: 195103
Other names: C. perfringens ATCC 13124, Clostridium perfringens str. ATCC 13124, Clostridium perfringens strain ATCC 13124

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CPF_0484	CPF_1098	CPF_0484	CPF_1098	Putative RNA polymerase sigma factor; Identified by similarity to SP:P17869; match to protein family HMM TIGR02937.	Putative membrane protein.	0.532
CPF_0484	galU	CPF_0484	CPF_0483	Putative RNA polymerase sigma factor; Identified by similarity to SP:P17869; match to protein family HMM TIGR02937.	UTP-glucose-1-phosphate uridylyltransferase; Identified by match to protein family HMM PF00483; match to protein family HMM TIGR01099.	0.401
CPF_0484	rpoA	CPF_0484	CPF_2685	Putative RNA polymerase sigma factor; Identified by similarity to SP:P17869; match to protein family HMM TIGR02937.	DNA-directed RNA polymerase, alpha subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.492
CPF_0484	rpoB	CPF_0484	CPF_2722	Putative RNA polymerase sigma factor; Identified by similarity to SP:P17869; match to protein family HMM TIGR02937.	DNA-directed RNA polymerase, beta subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.537
CPF_0484	rpoC	CPF_0484	CPF_2721	Putative RNA polymerase sigma factor; Identified by similarity to SP:P17869; match to protein family HMM TIGR02937.	DNA-directed RNA polymerase, beta' subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.523
CPF_1098	CPF_0484	CPF_1098	CPF_0484	Putative membrane protein.	Putative RNA polymerase sigma factor; Identified by similarity to SP:P17869; match to protein family HMM TIGR02937.	0.532
galU	CPF_0484	CPF_0483	CPF_0484	UTP-glucose-1-phosphate uridylyltransferase; Identified by match to protein family HMM PF00483; match to protein family HMM TIGR01099.	Putative RNA polymerase sigma factor; Identified by similarity to SP:P17869; match to protein family HMM TIGR02937.	0.401
rpoA	CPF_0484	CPF_2685	CPF_0484	DNA-directed RNA polymerase, alpha subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	Putative RNA polymerase sigma factor; Identified by similarity to SP:P17869; match to protein family HMM TIGR02937.	0.492
rpoA	rpoB	CPF_2685	CPF_2722	DNA-directed RNA polymerase, alpha subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	DNA-directed RNA polymerase, beta subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.998
rpoA	rpoC	CPF_2685	CPF_2721	DNA-directed RNA polymerase, alpha subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	DNA-directed RNA polymerase, beta' subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.998
rpoB	CPF_0484	CPF_2722	CPF_0484	DNA-directed RNA polymerase, beta subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	Putative RNA polymerase sigma factor; Identified by similarity to SP:P17869; match to protein family HMM TIGR02937.	0.537
rpoB	rpoA	CPF_2722	CPF_2685	DNA-directed RNA polymerase, beta subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	DNA-directed RNA polymerase, alpha subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.998
rpoB	rpoC	CPF_2722	CPF_2721	DNA-directed RNA polymerase, beta subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	DNA-directed RNA polymerase, beta' subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.999
rpoC	CPF_0484	CPF_2721	CPF_0484	DNA-directed RNA polymerase, beta' subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	Putative RNA polymerase sigma factor; Identified by similarity to SP:P17869; match to protein family HMM TIGR02937.	0.523
rpoC	rpoA	CPF_2721	CPF_2685	DNA-directed RNA polymerase, beta' subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	DNA-directed RNA polymerase, alpha subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.998
rpoC	rpoB	CPF_2721	CPF_2722	DNA-directed RNA polymerase, beta' subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	DNA-directed RNA polymerase, beta subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.999

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