Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CPF_0491Alpha-galactosidase; Identified by similarity to GB:AAD23585.1; match to protein family HMM PF02065. (734 aa)    
Predicted Functional Partners:
CPF_0766
Beta-galactosidase; Identified by match to protein family HMM PF00703; match to protein family HMM PF02836; match to protein family HMM PF02837; match to protein family HMM PF02929.
 
 
 0.965
pbg
Beta-galactosidase; Identified by match to protein family HMM PF02449; match to protein family HMM PF08532; match to protein family HMM PF08533.
 
  
 0.961
lacZ
Beta-galactosidase; Identified by similarity to SP:Q56307; match to protein family HMM PF00703; match to protein family HMM PF02836; match to protein family HMM PF02837; match to protein family HMM PF02929; match to protein family HMM PF08305; match to protein family HMM TIGR01167.
 
 
 0.961
CPF_1783
Sucrose-6-phosphate dehydrogenase; Enables the bacterium to metabolize sucrose as a sole carbon source; Belongs to the glycosyl hydrolase 32 family.
 
  
 0.947
CPF_0826
Glycosyl hydrolase, family 2; Identified by match to protein family HMM PF00703; match to protein family HMM PF02836; match to protein family HMM PF02837; Belongs to the glycosyl hydrolase 2 family.
 
 
 0.937
CPF_0421
Putative oligo-1,6-glucosidase; Identified by similarity to SP:P29094; match to protein family HMM PF00128.
  
 
 0.931
CPF_1551
Aldose 1-epimerase; Converts alpha-aldose to the beta-anomer.
 
 
 0.930
lacZ-2
Beta-galactosidase; Identified by similarity to SP:P26257; match to protein family HMM PF00404; match to protein family HMM PF00703; match to protein family HMM PF02836; match to protein family HMM PF02837; match to protein family HMM PF07532; Belongs to the glycosyl hydrolase 2 family.
 
 
 0.925
CPF_2333
Alpha-glucosidase; Identified by similarity to SP:Q9F234; match to protein family HMM PF01055; Belongs to the glycosyl hydrolase 31 family.
    
 0.908
CPF_2648
Glycosyl hydrolase, family 31; Identified by match to protein family HMM PF01055; Belongs to the glycosyl hydrolase 31 family.
    
 0.908
Your Current Organism:
Clostridium perfringens ATCC 13124
NCBI taxonomy Id: 195103
Other names: C. perfringens ATCC 13124, Clostridium perfringens str. ATCC 13124, Clostridium perfringens strain ATCC 13124
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