Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
CPF_0526Nitrite/sulfite reductase homolog; Identified by similarity to GB:BAA06530.1; match to protein family HMM PF01077; match to protein family HMM PF03460; Belongs to the nitrite and sulfite reductase 4Fe-4S domain family. (516 aa)    
Predicted Functional Partners:
CPF_2894
Putative glutamine synthetase; Identified by match to protein family HMM PF00120; Belongs to the glutamine synthetase family.
  
  
 0.932
hemD
uroporphyrinogen-III methyltransferase/synthase; Identified by similarity to GB:AAK00606.1; match to protein family HMM PF00590; match to protein family HMM PF02602; match to protein family HMM TIGR01469.
 
  
 0.928
gdhA
Glutamate dehydrogenase; Identified by similarity to GB:AAN15204.1; match to protein family HMM PF00208; match to protein family HMM PF02812; Belongs to the Glu/Leu/Phe/Val dehydrogenases family.
     
 0.923
CPF_2556
Major facilitator family transporter; Identified by match to protein family HMM PF07690.
    
 0.919
hcp
Hybrid cluster protein; Catalyzes the reduction of hydroxylamine to form NH(3) and H(2)O.
     
 0.910
CPF_1249
Oxidoreductase, 2-nitropropane dioxygenase family; Identified by match to protein family HMM PF03060.
     
 0.901
CPF_1689
Identified by match to protein family HMM TIGR01470.
 
  
 0.609
CPF_1191
Sodium:dicarboxylate symporter family; Identified by match to protein family HMM PF00375; Belongs to the dicarboxylate/amino acid:cation symporter (DAACS) (TC 2.A.23) family.
   
  
 0.589
CPF_0443
Putative sulfite/nitrite reductase; Identified by similarity to SP:Q05805; match to protein family HMM PF01077; match to protein family HMM PF03460.
 
   
 0.572
CPF_0728
Pyridine nucleotide-disulphide oxidoreductase family protein; Identified by match to protein family HMM PF00070; match to protein family HMM PF00581; match to protein family HMM PF02852; match to protein family HMM PF07992.
  
 
 0.504
Your Current Organism:
Clostridium perfringens ATCC 13124
NCBI taxonomy Id: 195103
Other names: C. perfringens ATCC 13124, Clostridium perfringens str. ATCC 13124, Clostridium perfringens strain ATCC 13124
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