CPF_0537 protein (Clostridium perfringens ATCC 13124)

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CPF_0537

Glycine betaine/L-proline transport, ATP-binding protein; Identified by match to protein family HMM PF00005; match to protein family HMM PF00571; match to protein family HMM TIGR01186. (378 aa)

Predicted Functional Partners:

CPF_0538

0.999

CPF_1791

0.435

CPF_0536

0.422

CPF_2589

0.422

CPF_0539

0.415

CPF_0540

0.415

CPF_1615

0.404

CPF_2553

0.400

Your Current Organism:

Clostridium perfringens ATCC 13124

NCBI taxonomy Id: 195103
Other names: C. perfringens ATCC 13124, Clostridium perfringens str. ATCC 13124, Clostridium perfringens strain ATCC 13124

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Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
CPF_0536	CPF_0537	Hypothetical protein; Identified by glimmer; putative.	Glycine betaine/L-proline transport, ATP-binding protein; Identified by match to protein family HMM PF00005; match to protein family HMM PF00571; match to protein family HMM TIGR01186.	0.422
CPF_0536	CPF_0538	Hypothetical protein; Identified by glimmer; putative.	Glycine betaine/L-proline ABC transporter, permease/glycine betaine/L-proline-binding protein; Identified by match to protein family HMM PF00528; match to protein family HMM PF04069.	0.422
CPF_0537	CPF_0536	Glycine betaine/L-proline transport, ATP-binding protein; Identified by match to protein family HMM PF00005; match to protein family HMM PF00571; match to protein family HMM TIGR01186.	Hypothetical protein; Identified by glimmer; putative.	0.422
CPF_0537	CPF_0538	Glycine betaine/L-proline transport, ATP-binding protein; Identified by match to protein family HMM PF00005; match to protein family HMM PF00571; match to protein family HMM TIGR01186.	Glycine betaine/L-proline ABC transporter, permease/glycine betaine/L-proline-binding protein; Identified by match to protein family HMM PF00528; match to protein family HMM PF04069.	0.999
CPF_0537	CPF_0539	Glycine betaine/L-proline transport, ATP-binding protein; Identified by match to protein family HMM PF00005; match to protein family HMM PF00571; match to protein family HMM TIGR01186.	RNA polymerase sigma-70 factor; Identified by match to protein family HMM PF04542; match to protein family HMM PF04545; match to protein family HMM PF08281; match to protein family HMM TIGR02937; match to protein family HMM TIGR02954; Belongs to the sigma-70 factor family. ECF subfamily.	0.415
CPF_0537	CPF_0540	Glycine betaine/L-proline transport, ATP-binding protein; Identified by match to protein family HMM PF00005; match to protein family HMM PF00571; match to protein family HMM TIGR01186.	Conserved hypothetical protein; Identified by similarity to GB:AAO35222.1.	0.415
CPF_0537	CPF_1615	Glycine betaine/L-proline transport, ATP-binding protein; Identified by match to protein family HMM PF00005; match to protein family HMM PF00571; match to protein family HMM TIGR01186.	TrkA domain protein; Identified by match to protein family HMM PF02080.	0.404
CPF_0537	CPF_1791	Glycine betaine/L-proline transport, ATP-binding protein; Identified by match to protein family HMM PF00005; match to protein family HMM PF00571; match to protein family HMM TIGR01186.	ABC transporter, permease protein; Identified by match to protein family HMM PF02687.	0.435
CPF_0537	CPF_2553	Glycine betaine/L-proline transport, ATP-binding protein; Identified by match to protein family HMM PF00005; match to protein family HMM PF00571; match to protein family HMM TIGR01186.	ABC transporter, permease protein; Identified by match to protein family HMM PF00528.	0.400
CPF_0537	CPF_2589	Glycine betaine/L-proline transport, ATP-binding protein; Identified by match to protein family HMM PF00005; match to protein family HMM PF00571; match to protein family HMM TIGR01186.	Transcriptional regulator, GntR family; Identified by match to protein family HMM PF00392; match to protein family HMM PF02080.	0.422
CPF_0538	CPF_0536	Glycine betaine/L-proline ABC transporter, permease/glycine betaine/L-proline-binding protein; Identified by match to protein family HMM PF00528; match to protein family HMM PF04069.	Hypothetical protein; Identified by glimmer; putative.	0.422
CPF_0538	CPF_0537	Glycine betaine/L-proline ABC transporter, permease/glycine betaine/L-proline-binding protein; Identified by match to protein family HMM PF00528; match to protein family HMM PF04069.	Glycine betaine/L-proline transport, ATP-binding protein; Identified by match to protein family HMM PF00005; match to protein family HMM PF00571; match to protein family HMM TIGR01186.	0.999
CPF_0538	CPF_0539	Glycine betaine/L-proline ABC transporter, permease/glycine betaine/L-proline-binding protein; Identified by match to protein family HMM PF00528; match to protein family HMM PF04069.	RNA polymerase sigma-70 factor; Identified by match to protein family HMM PF04542; match to protein family HMM PF04545; match to protein family HMM PF08281; match to protein family HMM TIGR02937; match to protein family HMM TIGR02954; Belongs to the sigma-70 factor family. ECF subfamily.	0.430
CPF_0538	CPF_0540	Glycine betaine/L-proline ABC transporter, permease/glycine betaine/L-proline-binding protein; Identified by match to protein family HMM PF00528; match to protein family HMM PF04069.	Conserved hypothetical protein; Identified by similarity to GB:AAO35222.1.	0.430
CPF_0538	CPF_1615	Glycine betaine/L-proline ABC transporter, permease/glycine betaine/L-proline-binding protein; Identified by match to protein family HMM PF00528; match to protein family HMM PF04069.	TrkA domain protein; Identified by match to protein family HMM PF02080.	0.556
CPF_0538	CPF_2589	Glycine betaine/L-proline ABC transporter, permease/glycine betaine/L-proline-binding protein; Identified by match to protein family HMM PF00528; match to protein family HMM PF04069.	Transcriptional regulator, GntR family; Identified by match to protein family HMM PF00392; match to protein family HMM PF02080.	0.570
CPF_0539	CPF_0537	RNA polymerase sigma-70 factor; Identified by match to protein family HMM PF04542; match to protein family HMM PF04545; match to protein family HMM PF08281; match to protein family HMM TIGR02937; match to protein family HMM TIGR02954; Belongs to the sigma-70 factor family. ECF subfamily.	Glycine betaine/L-proline transport, ATP-binding protein; Identified by match to protein family HMM PF00005; match to protein family HMM PF00571; match to protein family HMM TIGR01186.	0.415
CPF_0539	CPF_0538	RNA polymerase sigma-70 factor; Identified by match to protein family HMM PF04542; match to protein family HMM PF04545; match to protein family HMM PF08281; match to protein family HMM TIGR02937; match to protein family HMM TIGR02954; Belongs to the sigma-70 factor family. ECF subfamily.	Glycine betaine/L-proline ABC transporter, permease/glycine betaine/L-proline-binding protein; Identified by match to protein family HMM PF00528; match to protein family HMM PF04069.	0.430
CPF_0539	CPF_0540	RNA polymerase sigma-70 factor; Identified by match to protein family HMM PF04542; match to protein family HMM PF04545; match to protein family HMM PF08281; match to protein family HMM TIGR02937; match to protein family HMM TIGR02954; Belongs to the sigma-70 factor family. ECF subfamily.	Conserved hypothetical protein; Identified by similarity to GB:AAO35222.1.	0.882
CPF_0540	CPF_0537	Conserved hypothetical protein; Identified by similarity to GB:AAO35222.1.	Glycine betaine/L-proline transport, ATP-binding protein; Identified by match to protein family HMM PF00005; match to protein family HMM PF00571; match to protein family HMM TIGR01186.	0.415

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