CPF_0556 protein (Clostridium perfringens ATCC 13124)

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Score

CPF_0556

ABC transporter, solute-binding protein; Identified by match to protein family HMM PF01547. (461 aa)

Predicted Functional Partners:

CPF_0558

0.994

CPF_0557

0.988

CPF_0553

0.864

CPF_2654

0.813

CPF_1115

0.764

CPF_2338

0.764

CPF_2651

0.711

CPF_1114

0.702

CPF_0685

0.662

CPF_0555

0.574

Your Current Organism:

Clostridium perfringens ATCC 13124

NCBI taxonomy Id: 195103
Other names: C. perfringens ATCC 13124, Clostridium perfringens str. ATCC 13124, Clostridium perfringens strain ATCC 13124

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Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
CPF_0553	CPF_0555	Conserved hypothetical protein TIGR02336; Identified by similarity to GB:AAN25428.1; match to protein family HMM PF09508; match to protein family HMM TIGR02336.	DNA-binding response regulator, AraC family; Identified by match to protein family HMM PF00072; match to protein family HMM PF00165.	0.506
CPF_0553	CPF_0556	Conserved hypothetical protein TIGR02336; Identified by similarity to GB:AAN25428.1; match to protein family HMM PF09508; match to protein family HMM TIGR02336.	ABC transporter, solute-binding protein; Identified by match to protein family HMM PF01547.	0.864
CPF_0553	CPF_0557	Conserved hypothetical protein TIGR02336; Identified by similarity to GB:AAN25428.1; match to protein family HMM PF09508; match to protein family HMM TIGR02336.	ABC transporter, permease protein; Identified by match to protein family HMM PF00528.	0.636
CPF_0553	CPF_0558	Conserved hypothetical protein TIGR02336; Identified by similarity to GB:AAN25428.1; match to protein family HMM PF09508; match to protein family HMM TIGR02336.	ABC transporter, permease protein; Identified by match to protein family HMM PF00528.	0.557
CPF_0553	CPF_0685	Conserved hypothetical protein TIGR02336; Identified by similarity to GB:AAN25428.1; match to protein family HMM PF09508; match to protein family HMM TIGR02336.	Fibronectin type III domain protein; Identified by match to protein family HMM PF00041; match to protein family HMM PF02018; match to protein family HMM PF07532.	0.727
CPF_0555	CPF_0553	DNA-binding response regulator, AraC family; Identified by match to protein family HMM PF00072; match to protein family HMM PF00165.	Conserved hypothetical protein TIGR02336; Identified by similarity to GB:AAN25428.1; match to protein family HMM PF09508; match to protein family HMM TIGR02336.	0.506
CPF_0555	CPF_0556	DNA-binding response regulator, AraC family; Identified by match to protein family HMM PF00072; match to protein family HMM PF00165.	ABC transporter, solute-binding protein; Identified by match to protein family HMM PF01547.	0.574
CPF_0555	CPF_0557	DNA-binding response regulator, AraC family; Identified by match to protein family HMM PF00072; match to protein family HMM PF00165.	ABC transporter, permease protein; Identified by match to protein family HMM PF00528.	0.448
CPF_0555	CPF_0558	DNA-binding response regulator, AraC family; Identified by match to protein family HMM PF00072; match to protein family HMM PF00165.	ABC transporter, permease protein; Identified by match to protein family HMM PF00528.	0.484
CPF_0555	CPF_2338	DNA-binding response regulator, AraC family; Identified by match to protein family HMM PF00072; match to protein family HMM PF00165.	ABC transporter, permease protein; Identified by match to protein family HMM PF00528.	0.493
CPF_0556	CPF_0553	ABC transporter, solute-binding protein; Identified by match to protein family HMM PF01547.	Conserved hypothetical protein TIGR02336; Identified by similarity to GB:AAN25428.1; match to protein family HMM PF09508; match to protein family HMM TIGR02336.	0.864
CPF_0556	CPF_0555	ABC transporter, solute-binding protein; Identified by match to protein family HMM PF01547.	DNA-binding response regulator, AraC family; Identified by match to protein family HMM PF00072; match to protein family HMM PF00165.	0.574
CPF_0556	CPF_0557	ABC transporter, solute-binding protein; Identified by match to protein family HMM PF01547.	ABC transporter, permease protein; Identified by match to protein family HMM PF00528.	0.988
CPF_0556	CPF_0558	ABC transporter, solute-binding protein; Identified by match to protein family HMM PF01547.	ABC transporter, permease protein; Identified by match to protein family HMM PF00528.	0.994
CPF_0556	CPF_0685	ABC transporter, solute-binding protein; Identified by match to protein family HMM PF01547.	Fibronectin type III domain protein; Identified by match to protein family HMM PF00041; match to protein family HMM PF02018; match to protein family HMM PF07532.	0.662
CPF_0556	CPF_1114	ABC transporter, solute-binding protein; Identified by match to protein family HMM PF01547.	Sugar ABC transporter, permease protein; Identified by similarity to SP:P94529; match to protein family HMM PF00528.	0.702
CPF_0556	CPF_1115	ABC transporter, solute-binding protein; Identified by match to protein family HMM PF01547.	Sugar ABC transporter, permease protein; Identified by similarity to SP:P94530; match to protein family HMM PF00528.	0.764
CPF_0556	CPF_2338	ABC transporter, solute-binding protein; Identified by match to protein family HMM PF01547.	ABC transporter, permease protein; Identified by match to protein family HMM PF00528.	0.764
CPF_0556	CPF_2651	ABC transporter, solute-binding protein; Identified by match to protein family HMM PF01547.	Putative maltose/maltodextrin ABC transporter, permease protein; Identified by similarity to SP:P02916; match to protein family HMM PF00528.	0.711
CPF_0556	CPF_2654	ABC transporter, solute-binding protein; Identified by match to protein family HMM PF01547.	ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005; match to protein family HMM PF03459; match to protein family HMM PF08402; Belongs to the ABC transporter superfamily.	0.813

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