STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CPF_0761Conserved hypothetical protein; Identified by similarity to PIR:F96989. (451 aa)    
Predicted Functional Partners:
CPF_1699
Conserved hypothetical protein.
  
     0.612
prs
Ribose-phosphate pyrophosphokinase; Identified by similarity to SP:P08330; match to protein family HMM PF00156; match to protein family HMM TIGR01251; Belongs to the ribose-phosphate pyrophosphokinase family.
  
     0.544
CPF_1771
Hypothetical protein; Identified by glimmer; putative.
  
     0.537
CPF_2497
Identified by match to protein family HMM PF05866.
  
     0.508
CPF_0653
hesB family protein; Selenoprotein. identified by match to protein family HMM TIGR01911.
  
     0.493
CPF_1734
Conserved hypothetical protein; Identified by similarity to GB:AAO79751.1.
  
     0.492
CPF_1899
Conserved hypothetical protein; Identified by similarity to PIR:G97025.
  
     0.478
CPF_1704
Conserved hypothetical protein; Identified by similarity to GB:AAO35153.1; match to protein family HMM PF06803.
  
     0.457
CPF_1649
Identified by match to protein family HMM PF01261.
  
     0.452
CPF_2644
Conserved hypothetical protein; Identified by similarity to GB:AAM05996.1; match to protein family HMM PF01987.
  
     0.450
Your Current Organism:
Clostridium perfringens ATCC 13124
NCBI taxonomy Id: 195103
Other names: C. perfringens ATCC 13124, Clostridium perfringens str. ATCC 13124, Clostridium perfringens strain ATCC 13124
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.