Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-expression
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[Homology]
Score
CPF_0826Glycosyl hydrolase, family 2; Identified by match to protein family HMM PF00703; match to protein family HMM PF02836; match to protein family HMM PF02837; Belongs to the glycosyl hydrolase 2 family. (804 aa)    
Predicted Functional Partners:
CPF_0491
Alpha-galactosidase; Identified by similarity to GB:AAD23585.1; match to protein family HMM PF02065.
 
 
 0.937
CPF_1551
Aldose 1-epimerase; Converts alpha-aldose to the beta-anomer.
 
 
 0.936
CPF_1614
Glycosyl hydrolase, family 20; Identified by match to protein family HMM PF00041; match to protein family HMM PF00728; match to protein family HMM PF00754.
 
 0.931
nanJ
Sialidase; Identified by similarity to SP:P29767; similarity to PDB:2V73_B; match to protein family HMM PF00041; match to protein family HMM PF00754; match to protein family HMM PF02012; match to protein family HMM PF02973.
 
  
 0.921
nanI
Sialidase; Identified by similarity to SP:Q54727; similarity to PDB:2BF6_A; match to protein family HMM PF02012; match to protein family HMM PF02973.
 
  
 0.918
nanH
Sialidase; Identified by similarity to SP:P10481; similarity to GB:CAA50436.1; match to protein family HMM PF02012.
 
  
 0.914
CPF_1103
Glycosyl hydrolase, family 20; Identified by match to protein family HMM PF00728.
  
 0.912
CPF_0076
Putative glucokinase; Identified by similarity to SP:P54495; match to protein family HMM PF00480.
    
 0.905
pbg
Beta-galactosidase; Identified by match to protein family HMM PF02449; match to protein family HMM PF08532; match to protein family HMM PF08533.
 
 0.788
lacZ
Beta-galactosidase; Identified by similarity to SP:Q56307; match to protein family HMM PF00703; match to protein family HMM PF02836; match to protein family HMM PF02837; match to protein family HMM PF02929; match to protein family HMM PF08305; match to protein family HMM TIGR01167.
  
  
 
0.750
Your Current Organism:
Clostridium perfringens ATCC 13124
NCBI taxonomy Id: 195103
Other names: C. perfringens ATCC 13124, Clostridium perfringens str. ATCC 13124, Clostridium perfringens strain ATCC 13124
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