CPF_0836 protein (Clostridium perfringens ATCC 13124)

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Score

CPF_0836

DNA-binding response regulator; Identified by match to protein family HMM PF00072; match to protein family HMM PF00486. (222 aa)

Predicted Functional Partners:

CPF_0837

0.963

CPF_1243

0.878

CPF_0116

0.845

CPF_1402

0.824

CPF_2673

0.815

CPF_1140

0.802

CPF_2242

0.799

hpkA

0.797

virJ

0.790

CPF_0225

0.780

Your Current Organism:

Clostridium perfringens ATCC 13124

NCBI taxonomy Id: 195103
Other names: C. perfringens ATCC 13124, Clostridium perfringens str. ATCC 13124, Clostridium perfringens strain ATCC 13124

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structured XML interaction data, according to the 'PSI-MI' data standard

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... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CPF_0116	CPF_0836	CPF_0116	CPF_0836	Sensor histidine kinase; Identified by match to protein family HMM PF02518.	DNA-binding response regulator; Identified by match to protein family HMM PF00072; match to protein family HMM PF00486.	0.845
CPF_0116	CPF_2673	CPF_0116	CPF_2673	Sensor histidine kinase; Identified by match to protein family HMM PF02518.	Putative sensor histidine kinase; Identified by match to protein family HMM PF00512; match to protein family HMM PF02518.	0.500
CPF_0116	hpkA	CPF_0116	CPF_1195	Sensor histidine kinase; Identified by match to protein family HMM PF02518.	Sensor histidine kinase; Identified by match to protein family HMM PF00512; match to protein family HMM PF02518.	0.512
CPF_0225	CPF_0836	CPF_0225	CPF_0836	Sensor histidine kinase; Identified by match to protein family HMM PF00512; match to protein family HMM PF00672; match to protein family HMM PF02518.	DNA-binding response regulator; Identified by match to protein family HMM PF00072; match to protein family HMM PF00486.	0.780
CPF_0225	CPF_1243	CPF_0225	CPF_1243	Sensor histidine kinase; Identified by match to protein family HMM PF00512; match to protein family HMM PF00672; match to protein family HMM PF02518.	Sensory box histidine kinase; Identified by match to protein family HMM PF00512; match to protein family HMM PF00989; match to protein family HMM PF02518; match to protein family HMM PF08447; match to protein family HMM PF08448; match to protein family HMM TIGR00229.	0.810
CPF_0836	CPF_0116	CPF_0836	CPF_0116	DNA-binding response regulator; Identified by match to protein family HMM PF00072; match to protein family HMM PF00486.	Sensor histidine kinase; Identified by match to protein family HMM PF02518.	0.845
CPF_0836	CPF_0225	CPF_0836	CPF_0225	DNA-binding response regulator; Identified by match to protein family HMM PF00072; match to protein family HMM PF00486.	Sensor histidine kinase; Identified by match to protein family HMM PF00512; match to protein family HMM PF00672; match to protein family HMM PF02518.	0.780
CPF_0836	CPF_0837	CPF_0836	CPF_0837	DNA-binding response regulator; Identified by match to protein family HMM PF00072; match to protein family HMM PF00486.	Sensor histidine kinase; Identified by match to protein family HMM PF00512; match to protein family HMM PF02518.	0.963
CPF_0836	CPF_1140	CPF_0836	CPF_1140	DNA-binding response regulator; Identified by match to protein family HMM PF00072; match to protein family HMM PF00486.	Sensor histidine kinase; Identified by match to protein family HMM PF00512; match to protein family HMM PF02518.	0.802
CPF_0836	CPF_1243	CPF_0836	CPF_1243	DNA-binding response regulator; Identified by match to protein family HMM PF00072; match to protein family HMM PF00486.	Sensory box histidine kinase; Identified by match to protein family HMM PF00512; match to protein family HMM PF00989; match to protein family HMM PF02518; match to protein family HMM PF08447; match to protein family HMM PF08448; match to protein family HMM TIGR00229.	0.878
CPF_0836	CPF_1402	CPF_0836	CPF_1402	DNA-binding response regulator; Identified by match to protein family HMM PF00072; match to protein family HMM PF00486.	Sensor histidine kinase; Identified by match to protein family HMM PF00512; match to protein family HMM PF00672; match to protein family HMM PF02518.	0.824
CPF_0836	CPF_2242	CPF_0836	CPF_2242	DNA-binding response regulator; Identified by match to protein family HMM PF00072; match to protein family HMM PF00486.	Sensor histidine kinase; Identified by match to protein family HMM PF00512; match to protein family HMM PF02518.	0.799
CPF_0836	CPF_2673	CPF_0836	CPF_2673	DNA-binding response regulator; Identified by match to protein family HMM PF00072; match to protein family HMM PF00486.	Putative sensor histidine kinase; Identified by match to protein family HMM PF00512; match to protein family HMM PF02518.	0.815
CPF_0836	hpkA	CPF_0836	CPF_1195	DNA-binding response regulator; Identified by match to protein family HMM PF00072; match to protein family HMM PF00486.	Sensor histidine kinase; Identified by match to protein family HMM PF00512; match to protein family HMM PF02518.	0.797
CPF_0836	virJ	CPF_0836	CPF_2355	DNA-binding response regulator; Identified by match to protein family HMM PF00072; match to protein family HMM PF00486.	Sensor histidine kinase; Identified by similarity to GB:BAA78774.1; match to protein family HMM PF00512; match to protein family HMM PF00672; match to protein family HMM PF02518.	0.790
CPF_0837	CPF_0836	CPF_0837	CPF_0836	Sensor histidine kinase; Identified by match to protein family HMM PF00512; match to protein family HMM PF02518.	DNA-binding response regulator; Identified by match to protein family HMM PF00072; match to protein family HMM PF00486.	0.963
CPF_0837	CPF_2673	CPF_0837	CPF_2673	Sensor histidine kinase; Identified by match to protein family HMM PF00512; match to protein family HMM PF02518.	Putative sensor histidine kinase; Identified by match to protein family HMM PF00512; match to protein family HMM PF02518.	0.526
CPF_0837	hpkA	CPF_0837	CPF_1195	Sensor histidine kinase; Identified by match to protein family HMM PF00512; match to protein family HMM PF02518.	Sensor histidine kinase; Identified by match to protein family HMM PF00512; match to protein family HMM PF02518.	0.531
CPF_1140	CPF_0836	CPF_1140	CPF_0836	Sensor histidine kinase; Identified by match to protein family HMM PF00512; match to protein family HMM PF02518.	DNA-binding response regulator; Identified by match to protein family HMM PF00072; match to protein family HMM PF00486.	0.802
CPF_1140	CPF_1243	CPF_1140	CPF_1243	Sensor histidine kinase; Identified by match to protein family HMM PF00512; match to protein family HMM PF02518.	Sensory box histidine kinase; Identified by match to protein family HMM PF00512; match to protein family HMM PF00989; match to protein family HMM PF02518; match to protein family HMM PF08447; match to protein family HMM PF08448; match to protein family HMM TIGR00229.	0.429

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